Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08]
62,122 sequences; 1,120,143,088 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq56420 136 2e-29
seq48015 89.7 2e-15
>seq56420
Length=240
Score = 136 bits (150), Expect = 2e-29
Identities = 99/115 (86%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 182 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 123
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| || |||||| ||| ||||||||||| ||||| | |||| |||||||||
Sbjct 122 GGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCCGGGTCTAGGGGCGA 68
>seq48015
Length=9941
Score = 89.7 bits (98), Expect = 2e-15
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 6097 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 6038
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTA 128
| |||| |||||||||||| |||||||
Sbjct 6037 ACTGGCACGAGACCGATAGCCAACAAGTA 6009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078667483100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |