Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12271 185 1e-44 seq1535 78.8 1e-12 >seq12271 Length=53543 Score = 185 bits (204), Expect = 1e-44 Identities = 195/252 (77%), Gaps = 16/252 (6%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||| | Sbjct 1357 GTCAGTGTAGCGCGCATGTGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 1299 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134 ||| || | |||||| | ||| | |||||||||||| | | || ||| || Sbjct 1298 CAATCT-CGGGTGGCTGAACACCACTTGTCCCTCTAAGAGTTTGGACGCCGACCGC--TC 1242 Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | |||| ||| |||||| | | |||| |||| |||||||||||||||||| Sbjct 1241 G--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTTGTTCATTATCGGAATTAACCAGA 1184 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 ||||||||||||| |||||| ||| ||| ||| |||||||||| |||| |||| ||| Sbjct 1183 CAAATCACTCCACTAACTAATAACAGCCGTGCGCCACCACCCACGGAATTGAGAA--AGC 1126 Query 247 TATCAATCTGTC 258 | |||||||||| Sbjct 1125 TCTCAATCTGTC 1114 >seq1535 Length=97933 Score = 78.8 bits (86), Expect = 1e-12 Identities = 76/98 (78%), Gaps = 11/98 (11%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||| |||| ||||||||||||| ||||||||||||| ||||| | ||| || Sbjct 15645 GTCTTGTTTCTTATTGGAATTAACCAGAAAAATCACTCCACC----AAGAAGGTCCAGGC 15700 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 | |||||||||| ||||||||| |||||||| Sbjct 15701 ATCACCACCCAT-------GGAAAGAGCTCTCAATCTG 15731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796320480282