Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq12271 145 1e-32 >seq12271 Length=53543 Score = 145 bits (160), Expect = 1e-32 Identities = 165/220 (75%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | ||||| || ||||||||| Sbjct 1293 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCACATGCGCGCTAC 1351 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || ||| ||| ||||| ||| |||||| | | || | Sbjct 1352 ACTGACTGGCTCAGCTGGTGCATACCCTCCGCCGGCAGGCACGGGTAACCCGTTGAACCC 1411 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||| ||||||| | | |||||| || || | | | || ||||||| || |||||| Sbjct 1412 CACTCGTGGTGGGGATTGGGGATTGCAGTTCTTCCCCATGAATGAGGAATTCCCAGTAAG 1471 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 | ||||| ||| | ||||||| || |||||||||| Sbjct 1472 TCTGGGTCATAAGCTCATGTTGATTTAGTTCCTGCCCTTT 1511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946611580416