Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tyto_20alba_20[refseq_20GCF_5F000687205.1_202014-05-08] 62,122 sequences; 1,120,143,088 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq57275 165 3e-38 seq44181 158 4e-36 seq16454 127 7e-27 >seq57275 Length=277 Score = 165 bits (182), Expect = 3e-38 Identities = 96/99 (97%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTT 64 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 |||||||||||||||||||||||||||||| |||||||| Sbjct 65 GACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAAC 103 >seq44181 Length=1595 Score = 158 bits (174), Expect = 4e-36 Identities = 101/110 (92%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 323 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 382 |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct 137 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGGTAGTAGGTAGGGACAGTGGGAATCT 78 Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||| ||||||||||||| ||||||||| |||||| ||| |||||||||| Sbjct 77 TGTTCATCCATTCATGCGTGTCACTAATCAGATGATGAGACATTTGGCTA 28 >seq16454 Length=6344 Score = 127 bits (140), Expect = 7e-27 Identities = 144/194 (74%), Gaps = 7/194 (4%) Strand=Plus/Minus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||| ||||||||||||||| | | | || || | | |||||||||| ||| ||| Sbjct 4802 CCCAGTTATTCTACACCTCTGATGCCTCTTTGCAGCGCCAGACTAGAGTCTCGCTTCACA 4743 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 | ||| ||||||| ||||||||| ||||||||||| | ||| |||||||| || || Sbjct 4742 GCGTCGCCTTTCCCTGCTGATTCCTTCAAGCCCGTTCTCCCGGCGGTGGTTTCACTGCAT 4683 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 || | | | ||||| ||| || ||||| || | ||| ||||||||| ||||| Sbjct 4682 AGCA-------AGAATGGGACCCTCATTCATCCACTCCTCCGCATCACTAATTGGATGAT 4630 Query 419 GAGGCATTTGGCTA 432 ||| |||||||||| Sbjct 4629 GAGCCATTTGGCTA 4616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634184181056