Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Urile_20pelagicus_20[genbank_20GCA_5F002173435.1_202017-06-06] 20,951 sequences; 1,210,663,266 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq353 120 6e-25 seq108 77.0 6e-12 >seq353 Length=659688 Score = 120 bits (132), Expect = 6e-25 Identities = 176/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-TTTGCTCGAATACATTAGCATGG 132 |||||||||| |||||| |||||||||||||||||| || | | |||| ||| || Sbjct 286811 TTTACTTTGAGAAAATTGGAGTGTTCAAAGCAGGCCGGCTGTTGGCATACTGCAGCTAGG 286752 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 || ||| ||||||||| | | ||||| | |||||||||| |||| || | | ||||| Sbjct 286751 AACAATGGAATAGGAC-TCCAGTTCTGTCTTGTTGGTTTTCAGGAACGGGGCCAAGATTA 286693 Query 193 ATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 | ||||| || |||| || ||||| || | ||||||||||| |||| | Sbjct 286692 AGAGGGACAGCAAGGGGATGAATGTATTGTGCTGCTAAAGGTGAAATTCCTGGACTGGAA 286633 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||| ||| | |||||| || ||||| || ||||||||||||| |||| ||| Sbjct 286632 CAAGATGGCCTAGAGTGAAAGCATTTGCCAAGAATATTTTCATTAATCA-AGAACAGAAG 286574 Query 312 TTAG 315 | || Sbjct 286573 TCAG 286570 >seq108 Length=772802 Score = 77.0 bits (84), Expect = 6e-12 Identities = 127/181 (70%), Gaps = 7/181 (4%) Strand=Plus/Minus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||| | ||||||||||||||||||| | | | | | | |||||| | ||| Sbjct 726186 GAATAGGACC-GTGGTTCTATTTTGTTGGTTTTTGGAAACAGGGCCACGATTAAGAAGGA 726128 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTC-----AGAGGTGAAATTCTTGGATTTATTGAA 254 | | | | || ||||| ||||| |||||||||||||||||| | | || Sbjct 726127 TGGCCAGAGGCCATTGTATTGTATTGTGCTGCTAGAGGTGAAATTCTTGGACTGGTAAAA 726068 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| ||| | |||||| || ||||| ||| || ||||||||| |||| | ||| | Sbjct 726067 GACAGCCTAGAGTGAAAGCATTTGCCAAGAATGGTTACATTAATCA-AGAACAACAGTCA 726009 Query 315 G 315 | Sbjct 726008 G 726008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915008256448