Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30] 6,018 sequences; 1,052,600,561 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 3e-15 >seq2 Length=24127801 Score = 87.8 bits (96), Expect = 3e-15 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 || ||| ||||||||| || ||||||||||||| |||||||||||| ||| | ||||| Sbjct 17438773 AACTAAGCAGACAAATTGCTTCACCAACTAAGAAAGGCCATGCACCATCACTAACAGAAT 17438832 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 | |||||||||| || |||||| Sbjct 17438833 CGAGAAAGAGCTCTCCCTCTGTC 17438855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796753547058