Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zonotrichia_20albicollis_20[refseq_20GCF_5F000385455.1_202013-04-30]
6,018 sequences; 1,052,600,561 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 9e-35
>seq1
Length=45240865
Score = 152 bits (168), Expect = 9e-35
Identities = 159/205 (78%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||| | ||||||||| | | ||||| |||||||||| | |||||
Sbjct 41590087 TCATCAGTAGG-TAAAACCACCCTGTCTCACAAAGATCTAATCCCAGCTCACATCCCCTA 41590145
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
| | | ||| |||||||| |||| |||||||||||| ||| |||||||||
Sbjct 41590146 TCATAG--TGAGCAATCCAATGCTTGGTGAATTCTGCTTCCCAATGGCGGGAAGAGCCAC 41590203
Query 151 CATCGAAGGATCAAAAAGCAACGTCGC-TATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|| |||| |||||||||||| | || ||||| | |||||||||||||||||||| |
Sbjct 41590204 GATGAAAGGCTCAAAAAGCAACATTGCTTATGAGCACTTGGCTGCCACAAGCCAGTCCCC 41590263
Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234
|||| | ||||||| || |||||
Sbjct 41590264 CCTGCGTTAACTTTCCTCATACCTC 41590288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854348582208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |