Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020
15-09-14] 2,933 sequences; 1,036,003,386 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2527 340 3e-91
seq2163 163 5e-38
>seq2527
Length=97327
Score = 340 bits (376), Expect = 3e-91
Identities = 252/293 (86%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| | || |||||||||||||||||||||||||||||
Sbjct 80058 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 80117
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 80118 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 80177
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 80178 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 80237
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 80238 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 80297
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| ||| | | | |||||||| ||||| | |||||| ||| ||||||
Sbjct 80298 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATT 80350
>seq2163
Length=740661
Score = 163 bits (180), Expect = 5e-38
Identities = 173/226 (77%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126
|| || |||| ||||| | |||||| | || ||| |||||||| |||| ||||||||
Sbjct 252494 TCCAACCCCAACTCACATCCCCTATCACAGG-TGAGCAATCCAATGCTTGGTGAATTCTG 252436
Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186
| | |||||||||||||| | || |||||||||||||||||||| ||| ||||| |
Sbjct 252435 AAT---TCTGATAGGAAGAGCCAAGATGGAAGGATCAAAAAGCAACGTTGCTCTGAACCC 252379
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||| | ||||||||||||| | ||| |||||| || | ||
Sbjct 252378 TTGGCTGCCACAAGCCAGTCACCCCTGTGGTAACTCTCCTGACACCTCCTGCTTAAAGCA 252319
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| | | | ||| | | ||||| ||||||||||| ||||||
Sbjct 252318 CCAAAAGGCAGAAGAACCATGAGGCCCCACTTTCATGGGCTGTATT 252273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854374940448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |