Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zosterops_20lateralis_20melanops_20[genbank_20GCA_5F001281735.1_2020 15-09-14] 2,933 sequences; 1,036,003,386 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2527 340 3e-91 seq2163 163 5e-38 >seq2527 Length=97327 Score = 340 bits (376), Expect = 3e-91 Identities = 252/293 (86%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 80058 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 80117 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 80118 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 80177 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 80178 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 80237 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 80238 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 80297 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | ||| | | | |||||||| ||||| | |||||| ||| |||||| Sbjct 80298 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATT 80350 >seq2163 Length=740661 Score = 163 bits (180), Expect = 5e-38 Identities = 173/226 (77%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 || || |||| ||||| | |||||| | || ||| |||||||| |||| |||||||| Sbjct 252494 TCCAACCCCAACTCACATCCCCTATCACAGG-TGAGCAATCCAATGCTTGGTGAATTCTG 252436 Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 | | |||||||||||||| | || |||||||||||||||||||| ||| ||||| | Sbjct 252435 AAT---TCTGATAGGAAGAGCCAAGATGGAAGGATCAAAAAGCAACGTTGCTCTGAACCC 252379 Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 ||||||||||||||||||| | ||||||||||||| | ||| |||||| || | || Sbjct 252378 TTGGCTGCCACAAGCCAGTCACCCCTGTGGTAACTCTCCTGACACCTCCTGCTTAAAGCA 252319 Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | | | | ||| | | ||||| ||||||||||| |||||| Sbjct 252318 CCAAAAGGCAGAAGAACCATGAGGCCCCACTTTCATGGGCTGTATT 252273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854374940448