Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20mississippiensis_20[refseq_20GCF_5F000281125.3_202016- 03-28] 7,094 sequences; 2,161,730,208 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5657 396 9e-108 seq2722 376 8e-102 seq1467 347 4e-93 seq7022 300 5e-79 seq2055 300 5e-79 seq533 241 4e-61 seq640 233 6e-59 seq6071 199 1e-48 seq5917 147 7e-33 seq2195 141 3e-31 seq4000 134 5e-29 seq4011 127 7e-27 seq5127 125 2e-26 seq6215 114 4e-23 seq2899 114 4e-23 seq1328 109 2e-21 seq1210 107 6e-21 seq630 104 8e-20 seq487 104 8e-20 seq5461 98.7 3e-18 seq4772 98.7 3e-18 seq2524 91.5 5e-16 seq416 86.0 2e-14 >seq5657 Length=28110136 Score = 396 bits (438), Expect = 9e-108 Identities = 354/440 (80%), Gaps = 14/440 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | ||| || |||| ||||||| |||| |||| | ||||||||||||||| ||| | Sbjct 7092948 CTTCTTCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTACG 7093007 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| ||| ||| || |||||| |||||||||||||||||| |||| ||| || Sbjct 7093008 GTTTGACAAGTGTACCACCCCAGTCAAACTCCCCACCTGACACTGTCCCTGGAACGGGTC 7093067 Query 127 G------GCCCGCGAAGGAC-CTTAACGCCAGAAA--ATGGTCGGTGAAGACCAGTTCCG 177 | || |||| || | |||| ||||||| | | | | | | | || Sbjct 7093068 GCACCCAGCACGCGCCGGGCACTTAGAGCCAGAAGCGAGAGCCCCTCGGGGCTCGCCCCC 7093127 Query 178 CT---TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCGAA 232 || ||| | ||||| ||||||||||||| |||||||||||||||| ||| ||| Sbjct 7093128 CTGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACTGGCGGCCCGGG 7093187 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | |||||||||||||||||||||||| ||| ||||||| | | |||||||||||||| Sbjct 7093188 GGGCCTCCCACTTATTCTACACCTCTCATGTCTTTTCACAGCGCCAGACTAGAGTCAAGC 7093247 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 7093248 TCAACAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCA 7093307 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 7093308 CTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACGTCACTAATTA 7093367 Query 413 GATGACGAGGCATTTGGCTA 432 |||||||||||||||||||| Sbjct 7093368 GATGACGAGGCATTTGGCTA 7093387 Score = 221 bits (244), Expect = 4e-55 Identities = 157/180 (87%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312 |||||||| ||| |||||| | | ||||| |||||||||||||||||||||||||||| Sbjct 16867962 ACCTCTCATGTCTCTTCACAGTGCCAGACTAAAGTCAAGCTCAACAGGGTCTTCTTTCCC 16868021 Query 313 CGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 | |||||| ||||||||| ||||||||||||| |||| ||||||||||| |||||||| Sbjct 16868022 TGATGATTCTGCCAAGCCCATTCCCTTGGCTGTCCTTTCACTAGATAGTAGGTAGGGACA 16868081 Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| || ||||||||||| ||||||||||||||||| |||||||||| ||| Sbjct 16868082 ATGGGAATCTCATTCTTCCATTCATGCACGTCACTAATTAGATGATGAGGCATTTGACTA 16868141 Score = 159 bits (176), Expect = 1e-36 Identities = 96/101 (95%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| Sbjct 7094500 CCTTAAGAGAGTCATAGTTACTCCTGCCGTTTACCAGCGCTTCATTGAATTTCTTCACTT 7094559 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 7094560 TGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 7094600 Score = 123 bits (136), Expect = 8e-26 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||||||||||||||||||| ||| ||||||| |||| |||||||||||||||| ||| Sbjct 16869331 AGAGAGTCATAGTTACTCCTGCCATTTACCCATGCTTCATTGAATTTCTTCACTTCAACA 16869390 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||| |||||||||||||||| || |||||| Sbjct 16869391 TTCAGAGCATTGGGCAGAAATCACATCGCATCAACA 16869426 >seq2722 Length=16752973 Score = 376 bits (416), Expect = 8e-102 Identities = 350/439 (80%), Gaps = 13/439 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||| ||||| Sbjct 398435 CTTCTGCTCCACGGGAGCTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATTATG 398376 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| |||||||||||||||||| |||| | || || Sbjct 398375 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTCCCCGGAGTGGGTC 398316 Query 127 G-GC----CCGCGAAGGAC-CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTTCC- 176 | || ||||| || | ||| ||||||| | | | || | || || Sbjct 398315 GCGCTCAGCCGCGCCGGGCGCTTGGAGCCAGAAGCGAGAGCCCCTTGGGGCTCACCCCCC 398256 Query 177 -GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCGAAA 233 || ||| | ||||| |||||| |||||| ||||||||||||||| || ||| Sbjct 398255 TGCCTCACCGGGTAAGTGAAAAAATGATAAGAGTAGTGGTATTTCACCAGCAGCCCGGGG 398196 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 398195 GGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 398136 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| || Sbjct 398135 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCCTTCCCTTGACTGTGGTTTTGC 398076 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||||||| |||||||||||||||||| ||| ||||||||||| || ||||||||||| Sbjct 398075 TAGATAGTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGTGCATCACTAATTAG 398016 Query 414 ATGACGAGGCATTTGGCTA 432 ||| |||||||||||||| Sbjct 398015 TTGATGAGGCATTTGGCTA 397997 Score = 140 bits (154), Expect = 1e-30 Identities = 91/100 (91%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||| ||| |||||| | |||| ||||||||||||||||| Sbjct 14889567 CTTAAGAGAGTCATAGTTACTCCTGCCCTTTACCTGTGCTTCATTGAATTTCTTCACTTT 14889508 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| |||||||||||||||||||||| | |||||| Sbjct 14889507 GACATTCATAGCACTGGGCAGAAATCACATTACATCAACA 14889468 Score = 127 bits (140), Expect = 7e-27 Identities = 84/93 (90%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 |||||||||||| ||||||||||| ||||||||||||||||||| || ||||| ||||| Sbjct 14895453 GGCTGTGGTTTCACTAGATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCACTCATGT 14895394 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 || ||||||||||||||| ||||||||||||| Sbjct 14895393 GCATCACTAATTAGATGATAAGGCATTTGGCTA 14895361 Score = 102 bits (112), Expect = 3e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||| ||||| | |||| ||||||| |||| |||| | |||||||||||||| ||||| Sbjct 14895862 TCTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGTGTTAT 14895803 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 ||||| |||| | | | |||||| |||||||||||||||| Sbjct 14895802 GGTTTGACAGGTTTACTTCCCCAGTCAAACTCCCCACCTGA 14895762 >seq1467 Length=19222777 Score = 347 bits (384), Expect = 4e-93 Identities = 345/440 (78%), Gaps = 15/440 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||||||||||| |||| ||||||||||||||| ||| Sbjct 5726110 CTTCTGCTCCATGGGAGGTTTCTGTTCTCCCTGAGCTTGCCTTAGGACACCTGCATTACA 5726051 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||| | |||||||||||||||||| |||| ||| | | || Sbjct 5726050 GTTTGACAGGTGTACCGCCCCTGTCAAACTCCCCACCTGACACTGTCCCCAAAGCTGGTC 5725991 Query 127 G-GCCC-----GCGAAGGAC-CTTAACGCCAGAAAATGGT--CGGTGAAG----ACCAGT 173 |||| ||| || | ||| |||||||| | | | | | ||| | Sbjct 5725990 AAGCCCAGCATGCGCTGGGCACTTGGAGCCAGAAACGAGATCCCCTCATGGGTCACCCCT 5725931 Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 |||| ||| | ||| | |||||| |||||| |||||||||| ||| ||| | Sbjct 5725930 -CCGCCTCACCGGGTAAATGAAAAAATGATAAGATTAGTGGTATTAAACTGGCGGCCCGG 5725872 Query 234 CGGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 ||| |||||| ||| |||||||||||| ||| |||||| | || ||||||||||| Sbjct 5725871 TGGCCTCCCACATATCCTACACCTCTCATGTCTCTTCACAGTTCCAGAATAGAGTCAAGC 5725812 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 5725811 TCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCG 5725752 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||| ||||| |||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct 5725751 CTAGACAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGTATCGCTAATTA 5725692 Query 413 GATGACGAGGCATTTGGCTA 432 |||||||||||||||||||| Sbjct 5725691 GATGACGAGGCATTTGGCTA 5725672 >seq7022 Length=2146764 Score = 300 bits (332), Expect = 5e-79 Identities = 333/432 (77%), Gaps = 14/432 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 2133302 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCTTGAGCTCGCCTTAGGACACCTGCGTTACG 2133361 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| |||||||||| || |||| || || | | Sbjct 2133362 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCG---GAGTGGGTCA-CACCCAGCACA 2133417 Query 127 GGCCCG-CGAA-GGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 || | || ||| || | || ||| || | | ||| || | ||| Sbjct 2133418 TGCAGGGCGCTTGGAGCTAGAAGCGAGAGCCCC-TCAGGGCTCACCCCG-CCACCTCACC 2133475 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG--CTCCCA 242 | ||||| ||||||||||||| ||||||||||||||| ||| | | || |||||| Sbjct 2133476 GGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCCAGGGGGCCTCCCA 2133535 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||| ||| |||||| | | |||||||||||||||||||||||| Sbjct 2133536 CTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAACAGGGT 2133595 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA--GATAG 360 |||||||||| |||||||| |||||| || |||| |||||||||||||| || || || Sbjct 2133596 CTTCTTTCCCTGCTGATTCTGCCAAG-CCATTCCTTTGGCTGTGGTTTC-ATAGGGACAG 2133653 Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 | | ||||||||| ||||||||| || |||||||||||| |||||||| |||||||| || Sbjct 2133654 TGGGTAGGGACAGGGGGAATCTCATTCATCCATTCATGCACGTCACTAGTTAGATGATGA 2133713 Query 421 GGCATTTGGCTA 432 | |||||| ||| Sbjct 2133714 GACATTTGACTA 2133725 >seq2055 Length=9350 Score = 300 bits (332), Expect = 5e-79 Identities = 184/196 (94%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||||| Sbjct 2630 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAA 2689 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2690 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 2749 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2750 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCCTCCATTCATGCGCGTCACTAATTAGATA 2809 Query 417 ACGAGGCATTTGGCTA 432 |||||||||||||||| Sbjct 2810 ACGAGGCATTTGGCTA 2825 Score = 140 bits (154), Expect = 1e-30 Identities = 91/100 (91%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||| Sbjct 8541 CTTAAGGGAGTCATAGTTACTCCCGCCATTTACCAGCGCTTCATTGAATTTCTTCACTTT 8600 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| |||||| ||||||| Sbjct 8601 GACATTCAGAGCACTGGGCAGAAGTCACATCATGTCAACA 8640 >seq533 Length=83598005 Score = 241 bits (266), Expect = 4e-61 Identities = 324/447 (72%), Gaps = 32/447 (7%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| |||||| ||||||| || | | | | ||||| | ||| ||||| Sbjct 31075438 CTTCTGCTCCTCAGGAGTTTTCTGTCCTTCCCAAATTTTCTGTAGGATATATGCATTATG 31075497 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| | | || |||||| |||||||| ||| ||||| | || || | | | Sbjct 31075498 GTTTGACAGGTTTACCACCCCAGTCAAACTCCTCACATGACACTATCCCCAGAGCAGTTT 31075557 Query 127 GGCCCGCGAA-------GGACCTTAACGCCAGAAAATGGTCGGTGAAGACC-----AG-- 172 | || ||| || ||| ||||||| ||||| ||| || Sbjct 31075558 GCACCCAGAACACACCAGGGACTTGGAGCCAGAA--------GTGAAAACCCCTCAAGGC 31075609 Query 173 --TTCCGCT---TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT--TG 225 | || || ||| | ||||| ||||||| |||| ||| ||| |||||||| || Sbjct 31075610 TTTCCCCCTACCTCACCGGGTAAGTGAAAAAACTGTAAGAGTACTGGCATTTCACTGATG 31075669 Query 226 CGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGA 285 ||| || | ||| |||||||||||||||||| | ||| ||||||||| | |||||| Sbjct 31075670 -GCCCAAGAGCCTCACACTTATTCTACACCTCTTATGTCTTTTCACAAAC-CACACTAGA 31075727 Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 ||||||||||||||||||||| ||||| |||||||| |||||||| ||||| ||| |||| Sbjct 31075728 GTCAAGCTCAACAGGGTCTTCATTCCCTGCTGATTCTGCCAAGCCTGTTCCTTTG-CTGT 31075786 Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405 |||||| ||||| ||| | |||| | ||||| ||||| || || |||||||| || ||| Sbjct 31075787 GGTTTCTCTAGACAGTGGGTAGGAATAGTGGAAATCTTATTGATACATTCATGTGCATCA 31075846 Query 406 CTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||| ||| ||||||||| Sbjct 31075847 CTAATTAGATGATGAGATATTTGGCTA 31075873 Score = 194 bits (214), Expect = 5e-47 Identities = 158/189 (84%), Gaps = 7/189 (4%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| | | ||||| | | ||| ||||||||||| || Sbjct 12328038 CTCCCACTTATTCTACACCTCTCACGCCTCTTCACGGTGCCAGACCAGAGTCAAGCTAAA 12327979 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||| || || ||||||||| ||||||||| ||||| Sbjct 12327978 TAGGGTCTTCTTTCCCCACTGATTCTGC----CCTGTTCCCTTGCCTGTGGTTTTGCTAG 12327923 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||| || || ||||||||||| ||||||| || ||||||| | ||||||||||||||| Sbjct 12327922 ATAG-AGGTAAGGACAGTGGGACTCTCGTTCATACATTCAT--GTGTCACTAATTAGATG 12327866 Query 417 ACGAGGCAT 425 | ||||||| Sbjct 12327865 ATGAGGCAT 12327857 Score = 80.6 bits (88), Expect = 9e-13 Identities = 83/107 (78%), Gaps = 5/107 (5%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAG-TCCCCCTTAGGACACCTGCGTTATG 66 ||||||| | ||| ||||||| ||| | || || | ||||||||||||| ||||| Sbjct 24438428 TTTTGCTTCATGAGAGGTTTCTGTCCTCTCTAAGCTCAACTTTAGGACACCTGCATTATG 24438487 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||||||| || || |||||||||||||| |||| |||| Sbjct 24438488 GTTTCACAGATGTACCACC----CCAAACTCCCCACCAGACACTGTC 24438530 >seq640 Length=13835840 Score = 233 bits (258), Expect = 6e-59 Identities = 170/196 (87%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| |||||| | | || || ||||| |||| Sbjct 11207684 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGAGTAA--TCAAGTTCAA 11207627 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 || |||||||||||||| |||||||||||||||| ||| |||||||||||| ||||| Sbjct 11207626 CAAGGTCTTCTTTCCCCATTGATTCCGCCAAGCCCAATCCATTGGCTGTGGTTATGCTAG 11207567 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||| Sbjct 11207566 ATAGTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGCATGTCACTAATTAGATG 11207507 Query 417 ACGAGGCATTTGGCTA 432 | |||||||||||||| Sbjct 11207506 ATGAGGCATTTGGCTA 11207491 Score = 123 bits (136), Expect = 8e-26 Identities = 88/101 (87%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||| ||| |||| |||||| |||| |||||||||||||| Sbjct 11206277 CCTTAAGAGAGTCATAGTTCCTCTCGCCATTTACCTAAGCTTAAAAGAATTTCTTCACTT 11206218 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||| ||||| ||||||||||||| |||||| Sbjct 11206217 TGACATTCAGAGCAATGGGCCGAAATCACATTGCATCAACA 11206177 Score = 75.2 bits (82), Expect = 4e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 |||||||||| | ||||||| || ||||||||| ||||||||||| || |||||||||| Sbjct 11206088 TAGATAGTAGGTGGGGACAGCGGAAATCTCGTTCATCCATTCATGTGCATCACTAATTA 11206146 >seq6071 Length=9429414 Score = 199 bits (220), Expect = 1e-48 Identities = 200/256 (78%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 180 TCATTGATTAAGTaaaaaa--aCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAACGG 236 ||| ||| ||||| ||||| || | |||| |||||||||| || | || ||| | Sbjct 6314511 TCACTGAGTAAGTGAAAAAGGACAA-AAGGATAGTGGTATTACAGTAGCAGCCTCAGGAC 6314453 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| |||||||| |||| ||| | ||| | | |||| ||||||||||||| Sbjct 6314452 CTCCCACTTACTCTACACCACTCATGTCTCTATACAGTGCCAGACTGGAGTCAAGCTCAA 6314393 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| |||||||||||| |||||| |||||| || |||||||||||||| ||| | | Sbjct 6314392 CAGCATCTTCTTTCCCCAGTGATTCTGCCAAGGCCATTCCCTTGGCTGTGTTTTTGTTCT 6314333 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || |||| |||||||||| |||||||| || ||||||||| | | ||| |||||||||| Sbjct 6314332 ATTGTAGGTAGGGACAGTAGGAATCTCATTCTTCCATTCATACTCATCATTAATTAGATG 6314273 Query 417 ACGAGGCATTTGGCTA 432 | |||| | |||| || Sbjct 6314272 ATGAGGAACTTGGATA 6314257 >seq5917 Length=5686685 Score = 147 bits (162), Expect = 7e-33 Identities = 96/103 (93%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| Sbjct 2091215 GACTAGAGTCAAGCTCAACAGGGT-TTCTTTCCCCACTGATTCTGCCAAGCCA-TTCCCT 2091158 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATC 381 ||||||||||||||||||||||||| |||||||| |||||||| Sbjct 2091157 TGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAATGGGAATC 2091115 >seq2195 Length=14595547 Score = 141 bits (156), Expect = 3e-31 Identities = 92/101 (91%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||| Sbjct 10969290 CCTTAAGAGAGTCATAGTTACTCCCGCTGTTTGCCTGCACTTCATTGAATTTATTCACTT 10969349 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| ||||||||||||||||||||||| ||||||||| Sbjct 10969350 TGACATTGAGAGCACTGGGCAGAAATCACATCGCGTCAACA 10969390 >seq4000 Length=6281 Score = 134 bits (148), Expect = 5e-29 Identities = 192/266 (72%), Gaps = 17/266 (6%) Strand=Plus/Minus Query 21 GAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTG 80 ||| ||||||| |||| |||| | ||||||||||||||||||| ||||| ||| || Sbjct 4723 GAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAGGGTTTGCCAGGTGCA 4664 Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG------GCCCGCG 134 ||||||||| ||||||||||||||||| |||| | ||| ||| || |||| Sbjct 4663 CCGCCCCAGTCAAACTCCCCACCTGACGCTGTCCCCGGAGCGGGTCGCGCCCAGCACGCG 4604 Query 135 AAGGAC-CTTAACGCCAGAA---AATG---GTCGGTGAAGACCAGTTCCGCTTCATTGAT 187 || | ||| ||||||| | | |||| | || |||| ||| | Sbjct 4603 CTGGGCGCTTGGAGCCAGAAGCGAGAGCCCCTCGGGGCTCGCC--CCCCGCCTCACCGGG 4546 Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCGAAACGGCTCCCACTT 245 ||||| ||||||||||||| ||||||||||||||| ||| ||| | ||||||||| Sbjct 4545 TAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCCGGGGGGCCTCCCACTT 4486 Query 246 ATTCTACACCTCTCAAGTCATTTCAC 271 |||||||||||||| ||| ||||| Sbjct 4485 ATTCTACACCTCTCGTGTCTCTTCAC 4460 >seq4011 Length=4690409 Score = 127 bits (140), Expect = 7e-27 Identities = 93/108 (86%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| ||||||| |||| |||| || ||||||||||||||||||| | Sbjct 595808 CTTCTGCTCCACAGGAGGTTTCTGTCCTCCCTGAGCCCGCCTTAGGACACCTGCGTTACG 595749 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCA 114 ||| |||| ||| ||||||||| |||||||||||||||||| | ||| Sbjct 595748 ATTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACATTATCA 595701 >seq5127 Length=18782963 Score = 125 bits (138), Expect = 2e-26 Identities = 92/107 (86%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| ||||||| || | |||| | ||||||||||||||||||| | Sbjct 9425038 CTTCTGCTCCACAGGAGGTTTCTGTCCTTCCTGAGCTCGCCTTAGGACACCTGCGTTACG 9425097 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| |||||||||||||||||| |||| Sbjct 9425098 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC 9425144 >seq6215 Length=22149898 Score = 114 bits (126), Expect = 4e-23 Identities = 116/148 (78%), Gaps = 10/148 (7%) Strand=Plus/Minus Query 194 aaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC---GAAACGGCTCCCACTTATTCT 250 |||||| |||| ||||||||||||||| | | | | || ||||||||| || | Sbjct 6965732 AAAAAATGATA---GTAGTGGTATTTCACCAGTGGCCTGGGGAC--CTCCCACTTTTTAT 6965678 Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||| || ||||| ||| ||||||||| ||||||||||||||| ||||| Sbjct 6965677 ACACCTCTCATCTC--TTCACGGTGTCAGACTAGAGTTCAGCTCAACAGGGTCTGCTTTC 6965620 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || |||||||||||||||| |||| || Sbjct 6965619 TCCACTGATTCCGCCAAGCCTGTTCACT 6965592 >seq2899 Length=2777665 Score = 114 bits (126), Expect = 4e-23 Identities = 137/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||||||| || | ||| ||| ||||| |||| | | |||||||| |||| | Sbjct 1286213 CCCACTTATTCTAGACTTTTCATGTCTCTTCACGGAGTCAGGTTTGAGTCAAGATCAATA 1286272 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 | |||||| ||| ||||||| ||| |||| |||||||||||| ||||||| || | Sbjct 1286273 AAGCCTTCTTGCCCTACTGATTCTGCCCAGCCTGTTCCCTTGGCTCTGGTTTCACTGGGG 1286332 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 | | |||| |||||||| || ||| |||||| | | ||| |||||||| Sbjct 1286333 A--------GCACAGGAGGAATCTCATTCATCTATTCATCCATATTGCTATTTAGATGAT 1286384 Query 419 GAGGCAT 425 ||||||| Sbjct 1286385 GAGGCAT 1286391 >seq1328 Length=2391431 Score = 109 bits (120), Expect = 2e-21 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| |||||||||||||||||||||| ||||||||| | |||||||||||||||||| Sbjct 1757073 TAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCACGTGCGTCACTAATTAGATGA 1757014 Query 418 CGAGGCATTTGGCTA 432 | |||||||||||| Sbjct 1757013 CAGGGCATTTGGCTA 1756999 >seq1210 Length=32045156 Score = 107 bits (118), Expect = 6e-21 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 || ||| ||||||||| | ||| |||| || |||| || ||||||||||||| ||| Sbjct 23782523 GAAAGTTATAGTTACTTCTGCCATTTATCCATGCTTCATTAAATTTCTTCACTTAACCAT 23782464 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||| |||||||| Sbjct 23782463 TCAGAGCACTGGGCAGAAATCACATTGCTTCAACATC 23782427 Score = 87.8 bits (96), Expect = 6e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||| |||||||| ||||| Sbjct 20737350 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCACCTTAGTACACCTGCATTATG 20737291 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 | || ||| ||| | | ||||| |||||||||||| Sbjct 20737290 GCTTGGCAGGTGTACTGTCCCAGTCAAACTCCCCAC 20737255 >seq630 Length=1114 Score = 104 bits (114), Expect = 8e-20 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||| || ||| ||| || | ||| || ||||||||| ||| Sbjct 1060 CCTTAAGAGAGTCATAGTTACCCCTGCCATTTTGCCACACTTAATTAAATTTCTTCGCTT 1001 Query 493 TGACATTCAGAGCACTGGGCAGAAATC 519 ||||||| ||||||||||||||||||| Sbjct 1000 TGACATTAAGAGCACTGGGCAGAAATC 974 >seq487 Length=30449787 Score = 104 bits (114), Expect = 8e-20 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 22 AGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGC 81 || ||||||| |||| |||| | |||||||||||||| |||| ||||| |||| || | Sbjct 28714139 AGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGTGTTACGGTTTGACAGGAGTAC 28714080 Query 82 CGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||||||| |||||||||||||||||| |||| Sbjct 28714079 CGCCCCAGTCAAACTCCCCACCTGACACTGTC 28714048 >seq5461 Length=40299457 Score = 98.7 bits (108), Expect = 3e-18 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||| ||||||| | |||||||| || || |||||||||||||||||||||||||||| Sbjct 4767732 CATAATTACTCCTGTCGTTTACCTGCACTGCATTGAATTTCTTCACTTTGACATTCAGAG 4767673 Query 505 CACTGGGCAGAAATCACATTGCGTCAA 531 || |||||| ||||||| ||| |||| Sbjct 4767672 CATGGGGCAGGAATCACACTGCATCAA 4767646 >seq4772 Length=6342219 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | |||||||| ||||| |||| Sbjct 4916882 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCACCTTAGGATACCTGTGTTACA 4916823 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||||||||| ||| | ||||| | ||||||||||||||||| |||| Sbjct 4916822 GTTTAACAGGTGTACTGCCCCTGTCAAACTCCCCACCTGACGCTGTC 4916776 >seq2524 Length=25183099 Score = 91.5 bits (100), Expect = 5e-16 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||| | |||| ||||||| || | |||| | ||||||||||||| ||||| Sbjct 7237218 CTTTTGCCCCCTGGGAGGTTTCTGTCCTTCCTGAGCTCAATTTAGGACACCTGCATTATG 7237159 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATG 111 |||| || ||| || ||||||||||||||||||||||||| || Sbjct 7237158 GTTTGTTAGGTGTACCACCCCAGCCAAACTCCCCACCTGACACTG 7237114 >seq416 Length=44290501 Score = 86.0 bits (94), Expect = 2e-14 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| ||||||| ||| |||| | ||||||||||||| | ||| Sbjct 21990652 CTTCTGCTCCACAGGAGTTTTCTGTCTTCCCTGAGCTCGCCTTAGGACACCT-CATTACA 21990594 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 | | |||| | | | ||||||| |||||||||||||| ||| |||| Sbjct 21990593 ATCTGACAGGTCTACTGCCCCAGTCAAACTCCCCACCTCACACTGTC 21990547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635083998912