Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29] 9,317 sequences; 2,270,567,745 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq2821 239 5e-61 >seq2821 Length=3560 Score = 239 bits (264), Expect = 5e-61 Identities = 171/194 (88%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||| Sbjct 1943 TTACCTGAAGCTTAGAGGCTTTTCCTGGAAGCATGGCATCAACCACTTCTCCTTCTAAAA 1884 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATC-CCGGATTTACCTAAGATTCCAGCCTA 119 || ||||||||||||| |||||| ||| |||||||||||||| ||||||| Sbjct 1883 GAAGGATCGTCATCAGCTCTCGGCCT-AGACCGTCCGGATTTACCTAAACAGTCAGCCTA 1825 Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1824 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCCCCATCGC 1765 Query 180 ATTAACCAGAAGTA 193 | |||| ||||||| Sbjct 1764 AGTAACTAGAAGTA 1751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518353210026