Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29]
9,317 sequences; 2,270,567,745 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq2665 466 5e-129
>seq2665
Length=5473
Score = 466 bits (516), Expect = 5e-129
Identities = 402/496 (81%), Gaps = 5/496 (1%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| || |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1017 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 1076
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||| ||||||||| |||||||||| ||||||||| | |||||||| || || |
Sbjct 1077 GTGGATTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGACATGGAAGGAATCCCC 1136
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180
|||||| | || | | | | | || ||||||| ||||||| |||||||||
Sbjct 1137 GAGAGATTGGGGAGTGCTCGAAAGAGAACCTTTACACAGGTGCTGCATGGCTGTCGTCAG 1196
Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 1197 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCATTAGTTGC 1256
Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300
| | ||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1257 TACGA--AAG---GGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1311
Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360
|||||||| || ||||| |||||||| | ||||| ||||||| |||||||| ||||
Sbjct 1312 GACGTCAAGTCCTCATGGCCCTTATGGGTAGGGCTTCACACGTCATACAATGGTACATAC 1371
Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420
| ||||| || || |||||||| ||| ||||||| ||||| || ||| |||||||
Sbjct 1372 AGAGGGCTGCCAACCCGCGAGGGGGAGCTAATCCCAGAAAGTGTATCGTAGTCCGGATTG 1431
Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480
|||||||||||||||| |||||| |||||||||||||||||| |||||||||| |
Sbjct 1432 GAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGTCGC 1491
Query 481 GGTGAATACGTTCCCG 496
||||||||||||||||
Sbjct 1492 GGTGAATACGTTCCCG 1507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503859872320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |