Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29] 9,317 sequences; 2,270,567,745 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1949 343 3e-92 seq405 343 3e-92 seq247 343 3e-92 seq6 343 3e-92 seq258 336 4e-90 seq674 313 4e-83 seq685 304 2e-80 seq165 295 1e-77 seq546 241 2e-61 seq19 208 1e-51 seq652 196 8e-48 seq214 178 2e-42 seq424 174 3e-41 seq224 131 3e-28 seq304 127 3e-27 seq79 109 9e-22 seq812 104 4e-20 seq861 93.3 7e-17 >seq1949 Length=48478 Score = 343 bits (380), Expect = 3e-92 Identities = 254/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 39054 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 38995 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 38994 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 38935 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 38934 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 38875 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 38874 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 38815 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| |||||||| Sbjct 38814 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 38760 >seq405 Length=1880284 Score = 343 bits (380), Expect = 3e-92 Identities = 254/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 604807 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 604866 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 604867 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 604926 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 604927 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 604986 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 604987 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 605046 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| |||||||| Sbjct 605047 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 605101 >seq247 Length=2582379 Score = 343 bits (380), Expect = 3e-92 Identities = 254/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 1743149 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 1743208 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1743209 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 1743268 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1743269 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 1743328 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1743329 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 1743388 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| |||||||| Sbjct 1743389 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 1743443 >seq6 Length=7146147 Score = 343 bits (380), Expect = 3e-92 Identities = 254/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 5900736 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 5900795 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5900796 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 5900855 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5900856 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 5900915 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 5900916 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 5900975 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| |||||||| Sbjct 5900976 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 5901030 >seq258 Length=2522561 Score = 336 bits (372), Expect = 4e-90 Identities = 251/293 (86%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||| ||||||||||||||| Sbjct 837839 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTGAAACTAACCTGTCTC 837898 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 837899 ACGACGGTCTAAACCCAGCTCACATTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 837958 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 837959 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCAAAGGATCAAAAAGCAACGTCGCTA 838018 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || Sbjct 838019 TGAACGCTTGGCTGCCAGAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 838078 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | ||| | | | |||||||| ||||| |||||||| ||| |||||| Sbjct 838079 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCACTTTCACGGTCTGTATT 838131 >seq674 Length=1174493 Score = 313 bits (346), Expect = 4e-83 Identities = 247/295 (84%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 14450 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 14391 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | | |||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 14390 ACAATGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAATGCTTGGTG 14331 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 14330 AATTCTGCTTCACAATGATAGGAAGAGCCGACATTGAAGGATCAAAAAGCGACGTCGCTA 14271 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| |||||||||||||||||||||||||||||||||| ||||| || Sbjct 14270 TGAACGCTTGGCCACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGAAACCTCCTGCT 14211 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||| | | |||||| ||| |||||||| Sbjct 14210 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGACCCGCTTTCACGGTCTGTATTCA 14156 >seq685 Length=1154951 Score = 304 bits (336), Expect = 2e-80 Identities = 245/295 (83%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 555774 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 555715 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 555714 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAATGCTTGGTG 555655 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||| ||||||||| |||||| ||||||| |||||| ||||||||| Sbjct 555654 AATTCTGCTTCACAATGACAGGAAGAGCTGACATCAAAGGATCGAAAAGCGACGTCGCTA 555595 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 555594 TGAATGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 555535 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | | | | ||||||| ||||| |||||||| || |||||||| Sbjct 555534 TAGAGCCCAAAAAGTCAGAAGGATCATGAGGCCCCACTTTCACAGTCTGTATTCA 555480 >seq165 Length=3102812 Score = 295 bits (326), Expect = 1e-77 Identities = 243/295 (82%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || |||||||||||||||||||||||||| || Sbjct 1773464 TACTGAGCAGGATTACTATTGCAACAACTCATCATCAGTAGGGTAAAACTAACCTGTTTC 1773523 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 ||||| || |||||||||||||| ||||||||||||| |||||||||||| ||||| | Sbjct 1773524 ATGACCGTTTAAACCCAGCTCACTTTCCCTATTAGTGAGTGAACAATCCAGCGCTTGGTG 1773583 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||| |||||||| ||||| |||||||||||||||| ||| ||| Sbjct 1773584 AATTCTGCTTCACAATGATACGAAGAGCCCACATCAAAGGATCAAAAAGCAATGTCTCTA 1773643 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||| | ||||||||||| ||||||||||||||||| ||||||||||| |||||| || Sbjct 1773644 TGAATGTTTGGCTGCCACGAGCCAGTTATCCCTGTGATAACTTTTCTGACACCTCCTGCT 1773703 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | ||||||| ||||| |||||||||||| |||||||| Sbjct 1773704 TAAAACTCAAAAACTCATAAGGATCATGAGGCCCCACTTTCATGGTCTGTATTCA 1773758 >seq546 Length=1461707 Score = 241 bits (266), Expect = 2e-61 Identities = 175/203 (86%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||| ||||| ||||||| | ||||||| || |||||| |||||||| Sbjct 307330 TCATCAGTAGGGTAAAGCTAACTTGTCTCACAATGGTCTAACCCTAGCTCATGTTCCCTA 307389 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | | |||||||| ||||||| |||| ||| ||||||| ||||||||||||||||| Sbjct 307390 TCAATGGGTGAATAATCCAATGCTTGGTGAAGCCTGCTTCACAATGATAGGAAGAGCCGA 307449 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || |||||||||||||| || |||||||||| ||||||||||||||||||||||||| Sbjct 307450 CACTGAAGGATCAAAAAGTGACATCGCTATGAATGCTTGGCTGCCACAAGCCAGTTATCT 307509 Query 211 CTGTGGTAACTTTTCTGGCACCT 233 ||||||||||||||||| ||||| Sbjct 307510 CTGTGGTAACTTTTCTGACACCT 307532 >seq19 Length=5902638 Score = 208 bits (230), Expect = 1e-51 Identities = 175/215 (81%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| ||||||||||| ||| ||||||||||||| |||||| |||||||| |||||||| Sbjct 1582929 TCATTAGTAGGGTAAATCTACCCTGTCTCATGACAATCTAAAGCCAGCTCATGTTCCCTA 1582870 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||||| |||| |||||||||||| | |||||||||||| Sbjct 1582869 TTAGCGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTCACACCAACAGGAAGAGCCGA 1582810 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 | | |||||||||| || || |||||| || |||||| |||||||||| |||||| Sbjct 1582809 CTGCAAAGGATCAAACAGTGACATCGCTACAAATTCTTGGCCACCACAAGCCAATTATCC 1582750 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAAT 245 |||||||| |||||||| ||| || || | |||| Sbjct 1582749 CTGTGGTAGCTTTTCTGACACGTCCTGCTTTAAAT 1582715 >seq652 Length=1228470 Score = 196 bits (216), Expect = 8e-48 Identities = 161/196 (82%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||| |||||||||| || ||| ||||| || |||||| ||||||||||||||||| Sbjct 907008 GTCATCTGTAGGGTAAAGCTGGCCTTTCTCACGATAGTCTAAGCCCAGCTCACGTTCCCT 906949 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 || ||||||||||| |||| || | |||||||||||| |||||||||||||| Sbjct 906948 GTTGGTGGGTGAACAGTCCATTGCACAGTGAATTCTGCTTCACCATGATAGGAAGAGCTA 906889 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 || |||||| |||||||||||||| |||||||| |||| |||| |||||| |||||| Sbjct 906888 GCACCGAAGGGGCAAAAAGCAACGTCACTATGAACACTTGACTGCTACAAGCTGGTTATC 906829 Query 210 CCTGTGGTAACTTTTC 225 |||| |||| |||||| Sbjct 906828 CCTGGGGTATCTTTTC 906813 >seq214 Length=2721562 Score = 178 bits (196), Expect = 2e-42 Identities = 182/237 (77%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG----TCATCAGTAGGGTAAAACTAACCTGT 56 |||||||| | ||||| |||| | || | ||| |||||||||||||||||||||| Sbjct 2215300 TACTAAGCAGGATTACTATTG---CAACAGCACATCACCAGTAGGGTAAAACTAACCTGT 2215244 Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 |||||||| ||||||| ||||||||| ||||| |||| |||| ||||||| | | Sbjct 2215243 CTCATGACAGTCTAAATCCAGCTCACATTCCCCATTAATGGGCGAACAAT-----GTGTG 2215189 Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176 ||| | || | | |||||||| |||||| |||||||||||| || | Sbjct 2215188 GTAAATCTTCCTCCACAACCTTAGGAAGAATTGACATCAGAGGATCAAAAAGGGCTGTTG 2215129 Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 || ||||| |||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct 2215128 CTTTGAACACTTGGCCGCCACAAGGCAGTTATCCCTGTGGTAACTTTTCTGACACCT 2215072 >seq424 Length=1803875 Score = 174 bits (192), Expect = 3e-41 Identities = 160/201 (80%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||| ||||||||||||||| |||||||| | |||||| ||| ||| ||||| || Sbjct 39593 TCATCAGTTGGGTAAAACTAACCTTTCTCATGATGAACTAAACTCAGATCATGTTCCATA 39652 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | | ||| | |||||||| ||| |||||||| || |||| ||||| || || Sbjct 39653 TGGGAGGGCAATCAATCCAATACTTGGTGAATTCTGTTTTTCAATGACAGGAAAAGGTGA 39712 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || |||||||| ||||| || |||||||| ||||||| ||||||||||||||||| Sbjct 39713 CAGTGAAGGATC-AAAAGTGACACTGCTATGAATACTTGGCTACCACAAGCCAGTTATCC 39771 Query 211 CTGTGGTAACTTTTCTGGCAC 231 ||||||||||||||||| ||| Sbjct 39772 CTGTGGTAACTTTTCTGACAC 39792 >seq224 Length=2685205 Score = 131 bits (144), Expect = 3e-28 Identities = 131/170 (77%), Gaps = 14/170 (8%) Strand=Plus/Minus Query 68 CTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGC 127 |||||| ||||| | ||||||||||||||||||||||| ||| || | ||||||||| Sbjct 2237401 CTAAACTCAGCTTATATTCCCTATTAGTGGGTGAACAATAAAAC-CTCAATGAATTCTGC 2237343 Query 128 TTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCT 187 ||| |||||||||||||| ||||| |||||||||||||| || | ||||||||| | Sbjct 2237342 TTCAAGATGATAGGAAGAGCTGACATTGAAGGATCAAAAAGTGACATTGCTATGAACACC 2237283 Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAA---CTTTTCTGGCACCTC 234 || ||| ||||||||||||| | ||| |||| |||||| Sbjct 2237282 TG----------ACCAATTATCCCTGTGGTCATCCCTTATCTGACACCTC 2237243 >seq304 Length=2297201 Score = 127 bits (140), Expect = 3e-27 Identities = 88/100 (88%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1670145 TCATCAACAGGGTAAATTTAACCTGTCTCATGACTGTCTAAACCCAGCTCACGTTCCCTA 1670086 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||||| ||||||||| ||||| ||| | |||||||||| Sbjct 1670085 TTAGTAGGTGAACAACCCAACACTTGGTGGATTCTGCTTC 1670046 >seq79 Length=4140344 Score = 109 bits (120), Expect = 9e-22 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 |||| |||| ||||||||||||| | || |||||| || |||||| |||||||||||| Sbjct 2987139 AGCCAACATTGAAGGATCAAAAAATGATGTTGCTATGGACACTTGGCCGCCACAAGCCAG 2987198 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 |||||| |||||||| |||||||||||||| || | ||| | | | |||||||| Sbjct 2987199 TTATCCTTGTGGTAATTTTTCTGGCACCTCCTGCTTAAAACCCAAAAAGTCAAAAGGATC 2987258 Query 265 GATAGGCCACACT 277 ||||| |||| Sbjct 2987259 ATGAGGCCCCACT 2987271 >seq812 Length=948118 Score = 104 bits (114), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 39 AGGGTAAAACTAACCTGTCTCATG-ACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97 || ||||||||| |||||| | ||||| |||||| |||| |||||||| | || Sbjct 77274 AGAGTAAAACTA----GTCTCACGGACGGTGTAAACCTAGCTTTCGTTCCCTGCTCACGG 77219 Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 || | | |||| ||| | |||||||| ||||||||| ||||| || ||| Sbjct 77218 GTCCCCTGTGCAACACTTGGTCAGCTCTGCTTCCCGATGATAGGAGGAGCCAGCACTGAA 77159 Query 158 GGATCAAAAAGCAACGTCGCTATGAACGCTT-GGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||| ||||| ||| || |||||||| ||| ||| ||||||||||| | ||| ||| Sbjct 77158 GGATCGAAAAGTAACATCACTATGAACACTTTGGCCACCACAAGCCAGCTGCACCTCTGG 77099 Query 217 TAACTTTTCTGGCACCT 233 | ||||| ||| || || Sbjct 77098 TGACTTTGCTGACATCT 77082 >seq861 Length=860652 Score = 93.3 bits (102), Expect = 7e-17 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||| |||||||| |||| | |||||||||||||| || |||||| || Sbjct 241496 ATGAACGCTTGGCTGTCACAAGCCTGTTACCTCTGTGGTAACTTTTTTGACACCTCCTGC 241555 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | | | | | | ||||||| ||||| | |||||| |||||||||||| Sbjct 241556 TTAACACCTAAAAAGTCAGAAGGATCATGAGGCCCCGCTTTCACGGTTTGTATTCA 241611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854320395552