Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29]
9,317 sequences; 2,270,567,745 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq2665 313 7e-83
>seq2665
Length=5473
Score = 313 bits (346), Expect = 7e-83
Identities = 278/353 (79%), Gaps = 26/353 (7%)
Strand=Plus/Plus
Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223
||||||||||||||||||| ||||| || ||||||||| ||||||||||| | ||||
Sbjct 366 TCTGATTAGCTAGTTGGTAGGGTAAAAGCCTACCAAGGCATCGATCAGTAGCTGGTCTGA 425
Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283
|||| || | |||||| ||| |||||||||||| ||| |||||||||||||||||||||
Sbjct 426 GAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGT 485
Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343
||||||| ||| |||||||| || |||||| |||||| |||||||||| || ||||||
Sbjct 486 GGGGAATTTTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGAGTGAAGAAGGC 545
Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-------------------------TA 378
|||||||| |||||||||| | | |||||| ||
Sbjct 546 CTTCGGGTTGTAAAGCTCTTTTGTTCGGGAAGAAACGCGCCGGGTTAATACCCTGGTGTA 605
Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438
|||||||||| | || |||| |||||||||||||||||||||||||||||||||||
Sbjct 606 ATGACGGTACCGAAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGA 665
Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491
|||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||
Sbjct 666 AGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTT 717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497460468608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |