Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29]
9,317 sequences; 2,270,567,745 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq2665 150 4e-34
>seq2665
Length=5473
Score = 150 bits (166), Expect = 4e-34
Identities = 206/286 (72%), Gaps = 9/286 (3%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCAC---- 56
||||||||||||| ||||||||| ||||||||| | ||||| || |||
Sbjct 653 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTTCGGTACCGTCATTACACCAGGGTA 594
Query 57 ---ACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113
|| || |||| ||||| | |||||| ||||||| ||| || ||||| ||
Sbjct 593 TTAACCCGGCGCGTTTC-TTCCCGAACAAAAGAGCTTTACAACCCGAAGG-CCTTCTTCA 536
Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173
|||||| | | ||||| |||| | | |||||| |||| ||||| |||||||||||
Sbjct 535 CTCACGCGGCATTGCTGGATCAGGGTTGCCCCCATTGTCCAAAATTCCCCACTGCTGCCT 476
Query 174 CCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCC 233
||||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| | |
Sbjct 475 CCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGC 416
Query 234 TATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|| |||| | || ||| ||| |||||| || |||| |||||
Sbjct 415 TACTGATCGATGCCTTGGTAGGCTTTTACCCTACCAACTAGCTAAT 370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068700419904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |