Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29]
9,317 sequences; 2,270,567,745 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq687 466 5e-129
seq686 457 3e-126
seq100 457 3e-126
seq685 394 3e-107
seq707 372 9e-101
seq165 334 2e-89
seq102 331 3e-88
seq554 324 4e-86
seq156 316 6e-84
seq1522 282 1e-73
seq379 277 5e-72
seq220 212 2e-52
seq769 179 1e-42
seq90 145 2e-32
seq97 136 1e-29
seq552 131 5e-28
seq1158 125 2e-26
seq1526 113 1e-22
seq365 109 2e-21
>seq687
Length=1151737
Score = 466 bits (516), Expect = 5e-129
Identities = 418/516 (81%), Gaps = 14/516 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 118220 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 118161
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118160 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 118101
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 118100 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 118041
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||||||||||||||||| ||| ||||| | |||||| |
Sbjct 118040 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCGTCGTCGCCGCC 117981
Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294
| || | |||||| | | ||||| || ||||||| | | || | | ||
Sbjct 117980 ACGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCGAGCCCG 117921
Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTA 350
||||| |||| ||| |||||| ||| | | || || ||| | | | | |||||||
Sbjct 117920 GGTTGG-TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTA 117862
Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAA 408
||||||||||||||||||| |||||||| ||| | || | | |||| ||| ||||
Sbjct 117861 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCATAA 117802
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
||||||||||||||||||||||||||||||||| | | | ||||||||||||||||
Sbjct 117801 CTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCATG 117742
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||| ||||||||||
Sbjct 117741 GCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 117707
>seq686
Length=1154353
Score = 457 bits (506), Expect = 3e-126
Identities = 416/516 (81%), Gaps = 14/516 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 101284 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 101225
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101224 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 101165
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 101164 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 101105
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | |||||||||||||| |||||||||| ||| ||||| | ||||| |
Sbjct 101104 AGGCACAGAAAGTACCATCGAAAGTTAATAGGGCAGACATTCGAATGCGTCGTCGCCACC 101045
Query 240 TCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294
|| || | ||||||| | | ||||| || ||||||| | | | | ||
Sbjct 101044 ACAGGGGCGTGCGATTGACCCGAGGTTATCTAGAGTCACCAAAGCAGCTGGGTGAGCCCA 100985
Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTA 350
||||| |||| ||| |||||| ||| | | || || ||| | | | | |||||||
Sbjct 100984 GGTTGG-TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTA 100926
Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAA 408
||||||||||||||||||| |||||||| ||| | || | | |||| ||| ||||
Sbjct 100925 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCATAA 100866
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
||||||||||||||||||||||||||||||||| | | | ||||||||||||||||
Sbjct 100865 CTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCATG 100806
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||| ||||||||||
Sbjct 100805 GCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 100771
>seq100
Length=3810429
Score = 457 bits (506), Expect = 3e-126
Identities = 416/516 (81%), Gaps = 14/516 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 3155139 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 3155080
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3155079 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 3155020
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 3155019 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 3154960
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||||||||||||||||| ||| ||||| | || ||| |
Sbjct 3154959 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCGTCGTCACCGCC 3154900
Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTT 297
| || | |||||| | | ||||| || ||||||| | | || | | || |
Sbjct 3154899 ACGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCAGGCGAGCCTG 3154840
Query 298 GGT---TTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTAT 351
||| |||| ||| |||||| ||| | | || || ||| | | | |||||||||
Sbjct 3154839 GGTTGGTTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCACTCGTCAGCATGTAT 3154780
Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAATAAACGATAA 408
|||||||||||||||||| |||||||| ||| || | | | | |||| ||| ||||
Sbjct 3154779 TAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTA-GAGCGACCAAAGGAACCATAA 3154721
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
||||||||||||||||||||||||||||||||| | | | ||||||||||||||||
Sbjct 3154720 CTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCATG 3154661
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||| |||| ||||||||||
Sbjct 3154660 GCTTAATCTTTGAGACAAGCGTATG-CTACTGGCAG 3154626
>seq685
Length=1154951
Score = 394 bits (436), Expect = 3e-107
Identities = 405/518 (78%), Gaps = 16/518 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || |||||| || |||| | ||||| |||||||||||
Sbjct 547778 GTACTCATTCCAATTACAGGGCCTTGAAAGAGTCCAGTATTATTATTTTTTGTCACTACC 547719
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 547718 TCCCCGGGTCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCTGT 547659
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||||||||||| |||| |||||| |||||| ||||||| ||||| || | ||||| |
Sbjct 547658 TTCTCAGGCTCCTTCTCTGGAATCAAACCCTGATTCCCCATTACCTGTGGTCACCATTAT 547599
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | |||||| |||||||||||||||||| ||| |||| | || || |
Sbjct 547598 AGGCACAGAAAGTACCATTGAAAGTTGATAGGGCAGACATTCAAATGCATTGTCACCACC 547539
Query 240 TCAAG--GCCATGCGATTCGT--TAAGTTATTATGAATCACCAAGGAGCCCCG--AAG-- 291
| | | || |||| || | ||||| || ||||||| | | || | |||
Sbjct 547538 ACGGGGTGGGGTGTGATTGGTCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCAAGCC 547479
Query 292 GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATG 348
| ||||||||| | ||| |||||| ||| | | || || ||| | || | |||||
Sbjct 547478 CGGGTTGGTTTTGT-TCTGATAAATGCACGCATCCCCAGAGGTCAGCACTTGTCGGCATG 547420
Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGAT 406
|||| ||||||||| |||||| |||||||| ||| | || | | |||| ||| ||
Sbjct 547419 TATTCGCTCTAGAACTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCAT 547360
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466
||||||||||||||||||||||||||||||||||| | | | ||||||||||||||
Sbjct 547359 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCA 547300
Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||| ||||||||||
Sbjct 547299 TGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 547263
>seq707
Length=1104143
Score = 372 bits (412), Expect = 9e-101
Identities = 399/519 (77%), Gaps = 20/519 (4%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| |||||||||||
Sbjct 966768 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGCTATTTTTTGTCACTACC 966827
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||| || |||| |||||||||||| ||| |||||||||||||||||||||||||| |
Sbjct 966828 TCCCCTGGTTGGGAGTGGGTAATTTGCACGCTTGCTGCCTTCCTTGGATGTGGTAGCCAT 966887
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||| |||||||||| || |||||| ||||||||| | |||||| |
Sbjct 966888 TTCTCAGGCTCCCTCTCTGGAATCGAACTCTGATTCCCTGTTACCCGTGGTCACCATGAT 966947
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||| |||||||||||| |||| ||||||||| | || || |
Sbjct 966948 AGGCACAAAAAGTACCATCAAAAGTTGATAGGCCAGACATTTGAATGTGTCGTCACCACC 967007
Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG-- 295
|| || |||||||| | | ||||| || ||||||| | | | |||||
Sbjct 967008 ACAGGGGCATGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAG----CAGTTGGGCGAG 967063
Query 296 -TTG----GTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCAT 347
||| | |||| ||| |||||| || | | || || ||| | | || | ||||
Sbjct 967064 CTTGGGTTGGTTTTGGTCTGATAAATGCATGCATGCCCGGAGGTCAGCGCTTGTCGGCAT 967123
Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGA 405
||||||| |||||||||||||| |||||||| ||| | || | | |||| ||| |
Sbjct 967124 GTATTAGATCTAGAATTACCACAGTTATCCAAGTAATGGTTGGAGCAACCAAAGGAACCA 967183
Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465
|||||||||||||||||||||| ||||||||| || | | ||| |||||||||
Sbjct 967184 TAACTGATTTAATGAGCCATTCACAGTTTCACCATACCAGCCGTGTGTACATAGACATGC 967243
Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||||||| ||||||||||||| || |||||||
Sbjct 967244 ATAGCTTAATCTTTAAGACAAGCATATG-CTCCTGGCAG 967281
>seq165
Length=3102812
Score = 334 bits (370), Expect = 2e-89
Identities = 398/530 (75%), Gaps = 36/530 (7%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||| || | || | |||||| ||||||| ||||| | ||||||||
Sbjct 1783931 GTACTCATTCCAATTTCAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCATCACTACC 1783990
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
||||| ||||||| ||||||||| | ||||||| |||||||||||||||||| || |
Sbjct 1783991 TCCCCAGGTCGGGAGTGGGTAATTAGTATGCCTGCTTCCTTCCTTGGATGTGGTACCCAT 1784050
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||||||||||||||||| |||||||||||| ||||||| |||||| | | |||| |||
Sbjct 1784051 TTCTCAGGCTCCCTCTCCAGAATCGAACCCTGATTCCCCATTACCCATGGTCACCAAGGT 1784110
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC--- 236
|||| | || || | ||||||||||||||||| ||| ||||| ||| |||
Sbjct 1784111 AGGCACAAAAAGTAACAGCAAAAGTTGATAGGGCAGACATTCGAATG---CATTGCCACT 1784167
Query 237 GGCTCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC 294
| | || |||| || |||| | | | ||||| || ||||||| | | | |||||
Sbjct 1784168 GCCACAGGGCCGTGTGATTGACCTGAGGTTATCTAGAGTCACCAAAGTG----GCAGGGC 1784223
Query 295 --------GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTA 343
||||| |||| ||| |||||| || | | || || ||| | | | | |
Sbjct 1784224 GACCACAGGTTGG-TTTTGGTCTGATAAATGCATGCATCCCCAGAGGTCAGTGCTCATCA 1784282
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401
|||||||||||||||||||||| || |||||||| ||| | || | | |||| |
Sbjct 1784283 GCATGTATTAGCTCTAGAATTATCAAAGTTATCCAAGTAACGGTTGGAGCAACCAAAGGA 1784342
Query 402 ACGATAACTGATTTAATG-------AGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|| ||||||||||||||| ||||| ||||||||||||| | | | ||
Sbjct 1784343 ACTATAACTGATTTAATGGTTATTACACCATT-ACAGTTTCACTGTACCGGCCGTGTGTA 1784401
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1784402 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 1784450
>seq102
Length=3752443
Score = 331 bits (366), Expect = 3e-88
Identities = 347/449 (77%), Gaps = 13/449 (3%)
Strand=Plus/Minus
Query 67 GTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126
|||||| |||||||||||| |||||||||||| ||||| |||||| | ||||||||||
Sbjct 2603324 GTCGGGGGTGGGTAATTTGCATGCCTGCTGCCTTTCTTGGCTGTGGTTGTCGTTTCTCAG 2603265
Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186
|||||||||||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct 2603264 GCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACA 2603205
Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGC 246
| ||||||| |||| |||||||||||| ||| ||||| | || ||| | ||
Sbjct 2603204 GAAAGTACCATCAAAAGATGATAGGGCAGACATTCGAATGCGTCGTCACCGCCATGGGGG 2603145
Query 247 CATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----GTTGGT 300
| || ||| | | ||||| || ||||||| | | || | | || |||||
Sbjct 2603144 CTTGTGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCGAGCCCGGGTTGG- 2603086
Query 301 TTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATTAGCTC 357
|||| ||| |||||| ||| | | || || ||| | | | | ||||||||||||||
Sbjct 2603085 TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTATTAGCTC 2603026
Query 358 TAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACTGATTT 415
|||||||||||| |||||||| ||| | || | | |||| ||| |||||||||||
Sbjct 2603025 TAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCATAACTGATTT 2602966
Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475
|||||||||||||||||||||||||| | || | |||||||||||| ||||||||||
Sbjct 2602965 AATGAGCCATTCGCAGTTTCACTGTACCGGCTGTGTGTACTTAGACATGTATGGCTTAAT 2602906
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
||| |||||||||||||| ||||| |||
Sbjct 2602905 CTTGGAGACAAGCATATG-GTACTGACAG 2602878
>seq554
Length=1445144
Score = 324 bits (358), Expect = 4e-86
Identities = 310/388 (80%), Gaps = 17/388 (4%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 593701 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 593760
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593761 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 593820
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||
Sbjct 593821 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCATGGTCACCATGGT 593880
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||||||||||||||||| ||| ||||| ||||||| |
Sbjct 593881 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATG---CATCGCCACC 593937
Query 240 TCAA---GGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGG- 292
| | || | |||||| | | ||||| | ||||| ||| |||| ||| |
Sbjct 593938 GCCATGGGGGCGTGCGATCGGCCCGAGGTTATCTAGGGTCACCAAAGCAGCCGGGAAAGC 593997
Query 293 --GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCAT 347
| ||||| |||| |||||||||| ||| | | || || ||| | | | || ||||
Sbjct 593998 CTGGGTTGG-TTTTGGTCTAATAAATGCACGCATCCCCAGAGGTCAGCGCTCTTCGGCAT 594056
Query 348 GTATTAGCTCTAGAATTACCACGGTTAT 375
||||||| |||||||||||||| || ||
Sbjct 594057 GTATTAGGTCTAGAATTACCACAGTAAT 594084
>seq156
Length=3147509
Score = 316 bits (350), Expect = 6e-84
Identities = 349/452 (77%), Gaps = 17/452 (4%)
Strand=Plus/Plus
Query 66 TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125
||| |||| |||||||||| |||||||||||||||| |||||||||||| ||| |||
Sbjct 2542865 TGTTGGGAGTGGGTAATTTCATTGCCTGCTGCCTTCCTTAGATGTGGTAGCCATTTTTCA 2542924
Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185
||||||||||| ||||| ||||||| |||||| ||||||| | | ||||||||||||
Sbjct 2542925 GGCTCCCTCTCTGGAATTGAACCCTGATTCCCTGTTACCCATGGTCACCATGGTAGGCAC 2542984
Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC-TCAAG 244
| ||||||||||||||||||||||||| |||||| || |||||||| | | ||
Sbjct 2542985 AGAAAGTACCATCGAAAGTTGATAGGGCAGACATTTGACTGTGTCATCGCCGCCATGGAG 2543044
Query 245 GCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC---GTTGG 299
| | |||||| | | ||||| || ||||||| | || | | || ||| |
Sbjct 2543045 G-CGTGCGATAGGCCCGAGGTTATCTAGAGTCACCAAAGCAGCCGGGTGAGCCCGGTTTG 2543103
Query 300 TTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATTAGCT 356
||||| ||| |||||| | | | || || ||| | | | ||||||||||||||
Sbjct 2543104 TTTTTGGTCTGATAAATGTGCGCATCCCCGGAGGTCAGCACTCATCAGCATGTATTAGCT 2543163
Query 357 CTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACTGATT 414
||||||||||||| |||||||| ||| | || | | |||| || ||||||||||
Sbjct 2543164 CTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAAGCATAACTGATT 2543223
Query 415 TAATGAGCCATTCGCAGTTTCACTGT-ATAG-ATTGCTTATACTTAGACATGCATGGCTT 472
|||||||||||||||||||||||||| || || | ||||||||||||||||||||
Sbjct 2543224 TAATGAGCCATTCGCAGTTTCACTGTCCCAGCCATG--TGTACTTAGACATGCATGGCTT 2543281
Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| ||||||||||||||||| ||||||||||
Sbjct 2543282 AATTTTTGAGACAAGCATATG-CTACTGGCAG 2543312
>seq1522
Length=189187
Score = 282 bits (312), Expect = 1e-73
Identities = 386/520 (74%), Gaps = 32/520 (6%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAG-ACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTA-CC 59
||||||||||||||||||| || ||| || |||||| ||||| ||||||||| ||
Sbjct 129639 TACTCATTCCAATTACAAGGACTTGAAACAGTCCTGTAATGTTATTTTTTGTCACTATCC 129698
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
| || | | | ||| ||||||||||| | ||||||||||||||||||||||| ||||| |
Sbjct 129699 TTCCGGGGCCAGGAGTGGGTAATTTGTGTGCCTGCTGCCTTCCTTGGATGTGCTAGCCAT 129758
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|| ||||||||||||||| ||||| |||||| | |||| ||||| | | |||||| |
Sbjct 129759 TTTTCAGGCTCCCTCTCCAGAATCAAACCCTGAGTCCCTATTACCAGCAGTCACCATGCT 129818
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||||||||||||||||| |||||| | | | || |
Sbjct 129819 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTTGAGCAAGTCTTTACCACC 129878
Query 240 TCAAGGCCATGCGATTCGT--TAAGTTATTATGAATCACCAAG--GAGCCCCGAAGGGCG 295
|| || ||| | ||| || | ||||| | || || | | |||||| | |
Sbjct 129879 ACATGG-CATACCATTGGTCAGAGGTTATCA--AAGCAGCTGGGTGAGCCC------GGG 129929
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATT 352
|||| |||| |||| |||||| || | | || || ||| | | | | |||||||||
Sbjct 129930 TTGG-TTTTGATCTGATAAATGCATGCATCCCCAGAGGTCAGTGCTCAATGGCATGTATT 129988
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT---ACT-ATCAAA--TAAACGAT 406
| |||| ||||||||| |||||||| ||| | ||| | | |||||| | ||| |
Sbjct 129989 AACTCTGAAATTACCACAGTTATCCAAGTA--ATGGTTGGAGTGATCAAAGGTCAACAAC 130046
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTATACTTAGACATG 464
| ||||||||| |||||| ||||||||||||| || ||| | | |||||||||
Sbjct 130047 AGTTGATTTAATACGCCATTTACAGTTTCACTGTACCAGCCTTG--TGCATTTAGACATG 130104
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||| ||||||||||||||| |||| ||||||| ||
Sbjct 130105 CATGGCTTGATCTTTGAGACAAGCGTATG-CTACTGGGAG 130143
>seq379
Length=1995076
Score = 277 bits (306), Expect = 5e-72
Identities = 205/238 (86%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 897764 GTACTCATTCCAATTACAGGGCCTCCAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 897705
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 897704 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 897645
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||||||||||||||||| |||| ||||||| |||||||||||||| | | ||||||||
Sbjct 897644 TTCTCAGGCTCCCTCTCCAGAATTGAACCCTGATTCCCCGTTACCCTTGGTCACCATGGT 897585
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
||| | ||||||||||||||||||||||||| ||| ||||| | | ||||||
Sbjct 897584 AGGTACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCATCGTCGCCG 897527
Score = 138 bits (152), Expect = 3e-30
Identities = 130/163 (80%), Gaps = 11/163 (7%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATC-AAATAA 401
|||||||||||||||||||||||||| |||||||| ||| | | | | | ||| |
Sbjct 897877 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGTTGGAGTGACGAAAGGA 897936
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461
|| ||||||||||||||||||||||||||||||||||||| | | | |||||||||
Sbjct 897937 ACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGAC 897996
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||| ||||||||||||||||| ||||||||||
Sbjct 897997 A--------TTAATATTTGAGACAAGCATATG-CTACTGGCAG 898030
Score = 102 bits (112), Expect = 2e-19
Identities = 120/161 (75%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| | || | |||||||| |||| | ||||| | | ||| |
Sbjct 1003432 TACTCATTCCAATTAAAGAGCCTCAAAAGAGTCCTGCGTTGTTATTTTTCATTGCTATTT 1003373
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||| ||| | | | |||||||||| | ||||||||||||||| ||||||||| |||
Sbjct 1003372 CCCCAGGTCAGAAGTAGGTAATTTGCACACCTGCTGCCTTCCTTTAATGTGGTAGTTGTT 1003313
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
| |||| ||| ||| |||||| ||| | ||| ||| ||
Sbjct 1003312 TTTCAGTCTCTGTCTTTGGAATCAAACTGTGATTTCCCATT 1003272
>seq220
Length=2698975
Score = 212 bits (234), Expect = 2e-52
Identities = 183/227 (81%), Gaps = 10/227 (4%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || |||||| ||||||| ||||| | ||||||||
Sbjct 1602406 GTACTCATTCCAATTACAGGGCCTTGAAAGAGTCCTGTATTGTTATTTTTCATCACTACC 1602347
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| || |||| ||||||||||| ||||||||||||||||| ||||||||| | ||
Sbjct 1602346 TCCCCGGGTTGGGAGTGGGTAATTTGTGCGCCTGCTGCCTTCCTCAGATGTGGTACCTGT 1602287
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|| ||||||| ||||||| |||| |||||||||||||| |||| |||||||
Sbjct 1602286 TTTTCAGGCTTCCTCTCCAGAATTAAACCCTAATTCCCCATTAC---------CCATGGT 1602236
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226
|||| | ||||||| ||||||||||||||||| |||||||||
Sbjct 1602235 AGGCACAGAAAGTACCATCAAAAGTTGATAGGGCAGACATTTGAATG 1602189
>seq769
Length=1018780
Score = 179 bits (198), Expect = 1e-42
Identities = 139/163 (85%), Gaps = 3/163 (2%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401
|| ||||||||||||||||||||||| |||||||| ||| | || | | |||| |
Sbjct 965459 GCGTGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCAACCAAAGGA 965518
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461
|| ||||||||||||||||||||||||||||||||||||| | || | |||||||||
Sbjct 965519 ACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACTGGCTGTATGTACTTAGAC 965578
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 965579 ATGCACGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 965620
>seq90
Length=3931935
Score = 145 bits (160), Expect = 2e-32
Identities = 157/207 (76%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||| | ||||||| |||| | | |||| || ||||||||| ||||||| |||||
Sbjct 1318778 TATTTTTCATCACTACTTCCCTGGATTGGGAGTGAGTAATTTGCATGCCTGCTATCTTCC 1318837
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
|||||| || ||| | ||| |||||||||| || |||| ||||||| |||||| || |
Sbjct 1318838 TTGGATATGCTAGGCTTTT-TCAGGCTCCCATTCTAGAATTGAACCCTGATTCCCTGTCA 1318896
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
|| |||| |||||||||||| | |||||| ||||||||||| |||||| |||
Sbjct 1318897 CCTGTTGTCACCATGGTAGGCACAGAAAGTACCATTGAAAGTTGATAAGGCAGACATTCA 1318956
Query 223 AATGAACCATCGCCGGCTCAAGGCCAT 249
||||| ||| || | | || || |||
Sbjct 1318957 AATGAGTCATTGCTGCCACAGGGGCAT 1318983
>seq97
Length=3855401
Score = 136 bits (150), Expect = 1e-29
Identities = 143/187 (76%), Gaps = 1/187 (1%)
Strand=Plus/Plus
Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83
|||| ||| || || | ||||| | ||| ||| |||| |||||| ||||| |||
Sbjct 2487731 CAAACGAGTCCCGTGTTGTTATTTTTAATCATTACTTCCCTAGGTCGGGCATGGGTCATT 2487790
Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGG-TAGCCGTTTCTCAGGCTCCCTCTCCGGAAT 142
||| |||||||||||||||||||||||| |||| ||| | ||||||||| ||| | ||
Sbjct 2487791 TGCATGCCTGCTGCCTTCCTTGGATGTGGTTAGCTATTTTTTAGGCTCCCTTTCCAGGAT 2487850
Query 143 CGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAA 202
| |||||| |||||| |||||| || | ||||| ||||| || |||||| ||||
Sbjct 2487851 CAAACCCTGATTCCCTGTTACCTGTGGTCACCATATTAGGCACATAAAGTACCATTGAAA 2487910
Query 203 GTTGATA 209
|||||||
Sbjct 2487911 GTTGATA 2487917
>seq552
Length=1446633
Score = 131 bits (144), Expect = 5e-28
Identities = 104/124 (84%), Gaps = 1/124 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | || |||||||| || | ||||| | ||||||||
Sbjct 1266799 GTACTCATTCCAATTACAGGGCCTCGAACGAGCCCTGCATTATTATTTCTCATCACTACC 1266858
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| |||||||||| || | || ||||||||||||||| ||||||| |
Sbjct 1266859 TCCCCGAGTCGGGAGCGGGTAATTTGTGCACGTGTTGCCTTCCTTGGATGCGGTAGCCAT 1266918
Query 120 TTCT 123
||||
Sbjct 1266919 TTCT 1266922
>seq1158
Length=502201
Score = 125 bits (138), Expect = 2e-26
Identities = 164/228 (72%), Gaps = 13/228 (6%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||| ||||||| | ||||||| || ||| ||||| | ||||||||
Sbjct 403889 GTACTCATTCCAGTTACAAGGTCTCAAAAGAATTCTCTATTGTTATTTTTCATCACTACC 403830
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||| || ||| |||||||||||| | ||| |||| ||| ||||||||||||||| |
Sbjct 403829 ACCCCAGGTTCGGAATGGGTAATTTGCCCACCTACTGCTTTCTTTGGATGTGGTAGCCAT 403770
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||| || |||||| ||| | |||||||| ||||| || | |||||| |
Sbjct 403769 TTCCCA------------GGAATCAAACTCCAATTCCCCATTACCTGTGGTCACCATGTT 403722
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227
||| | ||| ||| |||||| ||||| ||| ||| |||||
Sbjct 403721 AGGAACAGAAAGTACTATCAAAAGTTATTAGGGAAGACATTCAAATGA 403674
>seq1526
Length=188672
Score = 113 bits (124), Expect = 1e-22
Identities = 119/154 (77%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 12 AATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGG 71
||||||| | || || ||| || ||| ||||| |||| |||| ||||| | || |
Sbjct 118328 AATTACAGGGCCTCAA-GAGACCCATATTGTTATTT-TTGTTACTAGCTCCCTGCCTCAG 118385
Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131
|| |||||||||| || |||||||| | | ||| |||||| |||| ||||||||||| |
Sbjct 118386 GAGTGGGTAATTTATGCACCTGCTGCATACATTGTATGTGGCAGCCATTTCTCAGGCTGC 118445
Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165
|||| | ||||| |||| | ||||||| ||||||
Sbjct 118446 CTCTTCAGAATCAAACCTTGATTCCCCATTACCC 118479
>seq365
Length=2040223
Score = 109 bits (120), Expect = 2e-21
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand=Plus/Minus
Query 33 CCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCT 92
||||||| ||||| | |||||||||| ||| ||| ||| ||||||||||| || |||
Sbjct 1430170 CCTGTAT---TATTTTTCGTCACTACCTGCCCTGGTCAGGAGTGGGTAATTTGAGCACCT 1430114
Query 93 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126
||||||||||||||||||||||||| ||||||||
Sbjct 1430113 GCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAG 1430080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510259276032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |