Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alligator_20sinensis_20[refseq_20GCF_5F000455745.1_202013-08-29] 9,317 sequences; 2,270,567,745 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq687 466 5e-129 seq686 457 3e-126 seq100 457 3e-126 seq685 394 3e-107 seq707 372 9e-101 seq165 334 2e-89 seq102 331 3e-88 seq554 324 4e-86 seq156 316 6e-84 seq1522 282 1e-73 seq379 277 5e-72 seq220 212 2e-52 seq769 179 1e-42 seq90 145 2e-32 seq97 136 1e-29 seq552 131 5e-28 seq1158 125 2e-26 seq1526 113 1e-22 seq365 109 2e-21 >seq687 Length=1151737 Score = 466 bits (516), Expect = 5e-129 Identities = 418/516 (81%), Gaps = 14/516 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 118220 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 118161 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118160 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 118101 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 118100 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 118041 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||||| | |||||| | Sbjct 118040 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCGTCGTCGCCGCC 117981 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 | || | |||||| | | ||||| || ||||||| | | || | | || Sbjct 117980 ACGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCGAGCCCG 117921 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTA 350 ||||| |||| ||| |||||| ||| | | || || ||| | | | | ||||||| Sbjct 117920 GGTTGG-TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTA 117862 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAA 408 ||||||||||||||||||| |||||||| ||| | || | | |||| ||| |||| Sbjct 117861 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCATAA 117802 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||||||||||||||||||| | | | |||||||||||||||| Sbjct 117801 CTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCATG 117742 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| |||||||||| Sbjct 117741 GCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 117707 >seq686 Length=1154353 Score = 457 bits (506), Expect = 3e-126 Identities = 416/516 (81%), Gaps = 14/516 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 101284 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 101225 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 101224 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 101165 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 101164 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 101105 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | |||||||||||||| |||||||||| ||| ||||| | ||||| | Sbjct 101104 AGGCACAGAAAGTACCATCGAAAGTTAATAGGGCAGACATTCGAATGCGTCGTCGCCACC 101045 Query 240 TCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 || || | ||||||| | | ||||| || ||||||| | | | | || Sbjct 101044 ACAGGGGCGTGCGATTGACCCGAGGTTATCTAGAGTCACCAAAGCAGCTGGGTGAGCCCA 100985 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTA 350 ||||| |||| ||| |||||| ||| | | || || ||| | | | | ||||||| Sbjct 100984 GGTTGG-TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTA 100926 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAA 408 ||||||||||||||||||| |||||||| ||| | || | | |||| ||| |||| Sbjct 100925 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCATAA 100866 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||||||||||||||||||| | | | |||||||||||||||| Sbjct 100865 CTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCATG 100806 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| |||||||||| Sbjct 100805 GCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 100771 >seq100 Length=3810429 Score = 457 bits (506), Expect = 3e-126 Identities = 416/516 (81%), Gaps = 14/516 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 3155139 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 3155080 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3155079 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 3155020 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 3155019 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 3154960 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||||| | || ||| | Sbjct 3154959 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCGTCGTCACCGCC 3154900 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTT 297 | || | |||||| | | ||||| || ||||||| | | || | | || | Sbjct 3154899 ACGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCAGGCGAGCCTG 3154840 Query 298 GGT---TTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTAT 351 ||| |||| ||| |||||| ||| | | || || ||| | | | ||||||||| Sbjct 3154839 GGTTGGTTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCACTCGTCAGCATGTAT 3154780 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAATAAACGATAA 408 |||||||||||||||||| |||||||| ||| || | | | | |||| ||| |||| Sbjct 3154779 TAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTA-GAGCGACCAAAGGAACCATAA 3154721 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||||||||||||||||||| | | | |||||||||||||||| Sbjct 3154720 CTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCATG 3154661 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| |||| |||||||||| Sbjct 3154660 GCTTAATCTTTGAGACAAGCGTATG-CTACTGGCAG 3154626 >seq685 Length=1154951 Score = 394 bits (436), Expect = 3e-107 Identities = 405/518 (78%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || |||||| || |||| | ||||| ||||||||||| Sbjct 547778 GTACTCATTCCAATTACAGGGCCTTGAAAGAGTCCAGTATTATTATTTTTTGTCACTACC 547719 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 547718 TCCCCGGGTCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCTGT 547659 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||| |||| |||||| |||||| ||||||| ||||| || | ||||| | Sbjct 547658 TTCTCAGGCTCCTTCTCTGGAATCAAACCCTGATTCCCCATTACCTGTGGTCACCATTAT 547599 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | |||||| |||||||||||||||||| ||| |||| | || || | Sbjct 547598 AGGCACAGAAAGTACCATTGAAAGTTGATAGGGCAGACATTCAAATGCATTGTCACCACC 547539 Query 240 TCAAG--GCCATGCGATTCGT--TAAGTTATTATGAATCACCAAGGAGCCCCG--AAG-- 291 | | | || |||| || | ||||| || ||||||| | | || | ||| Sbjct 547538 ACGGGGTGGGGTGTGATTGGTCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCAAGCC 547479 Query 292 GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATG 348 | ||||||||| | ||| |||||| ||| | | || || ||| | || | ||||| Sbjct 547478 CGGGTTGGTTTTGT-TCTGATAAATGCACGCATCCCCAGAGGTCAGCACTTGTCGGCATG 547420 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGAT 406 |||| ||||||||| |||||| |||||||| ||| | || | | |||| ||| || Sbjct 547419 TATTCGCTCTAGAACTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCAT 547360 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||||||||||||||||||||||||||||||| | | | |||||||||||||| Sbjct 547359 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACATGCA 547300 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| |||||||||| Sbjct 547299 TGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 547263 >seq707 Length=1104143 Score = 372 bits (412), Expect = 9e-101 Identities = 399/519 (77%), Gaps = 20/519 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| ||||||||||| Sbjct 966768 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGCTATTTTTTGTCACTACC 966827 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||| || |||| |||||||||||| ||| |||||||||||||||||||||||||| | Sbjct 966828 TCCCCTGGTTGGGAGTGGGTAATTTGCACGCTTGCTGCCTTCCTTGGATGTGGTAGCCAT 966887 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||| |||||||||| || |||||| ||||||||| | |||||| | Sbjct 966888 TTCTCAGGCTCCCTCTCTGGAATCGAACTCTGATTCCCTGTTACCCGTGGTCACCATGAT 966947 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||| |||||||||||| |||| ||||||||| | || || | Sbjct 966948 AGGCACAAAAAGTACCATCAAAAGTTGATAGGCCAGACATTTGAATGTGTCGTCACCACC 967007 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG-- 295 || || |||||||| | | ||||| || ||||||| | | | ||||| Sbjct 967008 ACAGGGGCATGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAG----CAGTTGGGCGAG 967063 Query 296 -TTG----GTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCAT 347 ||| | |||| ||| |||||| || | | || || ||| | | || | |||| Sbjct 967064 CTTGGGTTGGTTTTGGTCTGATAAATGCATGCATGCCCGGAGGTCAGCGCTTGTCGGCAT 967123 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGA 405 ||||||| |||||||||||||| |||||||| ||| | || | | |||| ||| | Sbjct 967124 GTATTAGATCTAGAATTACCACAGTTATCCAAGTAATGGTTGGAGCAACCAAAGGAACCA 967183 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 |||||||||||||||||||||| ||||||||| || | | ||| ||||||||| Sbjct 967184 TAACTGATTTAATGAGCCATTCACAGTTTCACCATACCAGCCGTGTGTACATAGACATGC 967243 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||| ||||||||||||| || ||||||| Sbjct 967244 ATAGCTTAATCTTTAAGACAAGCATATG-CTCCTGGCAG 967281 >seq165 Length=3102812 Score = 334 bits (370), Expect = 2e-89 Identities = 398/530 (75%), Gaps = 36/530 (7%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||| || | || | |||||| ||||||| ||||| | |||||||| Sbjct 1783931 GTACTCATTCCAATTTCAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCATCACTACC 1783990 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||| ||||||| ||||||||| | ||||||| |||||||||||||||||| || | Sbjct 1783991 TCCCCAGGTCGGGAGTGGGTAATTAGTATGCCTGCTTCCTTCCTTGGATGTGGTACCCAT 1784050 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||| |||||||||||| ||||||| |||||| | | |||| ||| Sbjct 1784051 TTCTCAGGCTCCCTCTCCAGAATCGAACCCTGATTCCCCATTACCCATGGTCACCAAGGT 1784110 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC--- 236 |||| | || || | ||||||||||||||||| ||| ||||| ||| ||| Sbjct 1784111 AGGCACAAAAAGTAACAGCAAAAGTTGATAGGGCAGACATTCGAATG---CATTGCCACT 1784167 Query 237 GGCTCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC 294 | | || |||| || |||| | | | ||||| || ||||||| | | | ||||| Sbjct 1784168 GCCACAGGGCCGTGTGATTGACCTGAGGTTATCTAGAGTCACCAAAGTG----GCAGGGC 1784223 Query 295 --------GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTA 343 ||||| |||| ||| |||||| || | | || || ||| | | | | | Sbjct 1784224 GACCACAGGTTGG-TTTTGGTCTGATAAATGCATGCATCCCCAGAGGTCAGTGCTCATCA 1784282 Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401 |||||||||||||||||||||| || |||||||| ||| | || | | |||| | Sbjct 1784283 GCATGTATTAGCTCTAGAATTATCAAAGTTATCCAAGTAACGGTTGGAGCAACCAAAGGA 1784342 Query 402 ACGATAACTGATTTAATG-------AGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 || ||||||||||||||| ||||| ||||||||||||| | | | || Sbjct 1784343 ACTATAACTGATTTAATGGTTATTACACCATT-ACAGTTTCACTGTACCGGCCGTGTGTA 1784401 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1784402 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 1784450 >seq102 Length=3752443 Score = 331 bits (366), Expect = 3e-88 Identities = 347/449 (77%), Gaps = 13/449 (3%) Strand=Plus/Minus Query 67 GTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126 |||||| |||||||||||| |||||||||||| ||||| |||||| | |||||||||| Sbjct 2603324 GTCGGGGGTGGGTAATTTGCATGCCTGCTGCCTTTCTTGGCTGTGGTTGTCGTTTCTCAG 2603265 Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186 |||||||||||||||||||||||| |||||||||||||||| | |||||||||||| Sbjct 2603264 GCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACA 2603205 Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGC 246 | ||||||| |||| |||||||||||| ||| ||||| | || ||| | || Sbjct 2603204 GAAAGTACCATCAAAAGATGATAGGGCAGACATTCGAATGCGTCGTCACCGCCATGGGGG 2603145 Query 247 CATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----GTTGGT 300 | || ||| | | ||||| || ||||||| | | || | | || ||||| Sbjct 2603144 CTTGTGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCGAGCCCGGGTTGG- 2603086 Query 301 TTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATTAGCTC 357 |||| ||| |||||| ||| | | || || ||| | | | | |||||||||||||| Sbjct 2603085 TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTATTAGCTC 2603026 Query 358 TAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||| |||||||| ||| | || | | |||| ||| ||||||||||| Sbjct 2603025 TAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAACCATAACTGATTT 2602966 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||||||||||||||||| | || | |||||||||||| |||||||||| Sbjct 2602965 AATGAGCCATTCGCAGTTTCACTGTACCGGCTGTGTGTACTTAGACATGTATGGCTTAAT 2602906 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||| |||||||||||||| ||||| ||| Sbjct 2602905 CTTGGAGACAAGCATATG-GTACTGACAG 2602878 >seq554 Length=1445144 Score = 324 bits (358), Expect = 4e-86 Identities = 310/388 (80%), Gaps = 17/388 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 593701 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 593760 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 593761 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 593820 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||| | | |||||||| Sbjct 593821 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCATGGTCACCATGGT 593880 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||||| ||||||| | Sbjct 593881 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATG---CATCGCCACC 593937 Query 240 TCAA---GGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGG- 292 | | || | |||||| | | ||||| | ||||| ||| |||| ||| | Sbjct 593938 GCCATGGGGGCGTGCGATCGGCCCGAGGTTATCTAGGGTCACCAAAGCAGCCGGGAAAGC 593997 Query 293 --GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCAT 347 | ||||| |||| |||||||||| ||| | | || || ||| | | | || |||| Sbjct 593998 CTGGGTTGG-TTTTGGTCTAATAAATGCACGCATCCCCAGAGGTCAGCGCTCTTCGGCAT 594056 Query 348 GTATTAGCTCTAGAATTACCACGGTTAT 375 ||||||| |||||||||||||| || || Sbjct 594057 GTATTAGGTCTAGAATTACCACAGTAAT 594084 >seq156 Length=3147509 Score = 316 bits (350), Expect = 6e-84 Identities = 349/452 (77%), Gaps = 17/452 (4%) Strand=Plus/Plus Query 66 TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125 ||| |||| |||||||||| |||||||||||||||| |||||||||||| ||| ||| Sbjct 2542865 TGTTGGGAGTGGGTAATTTCATTGCCTGCTGCCTTCCTTAGATGTGGTAGCCATTTTTCA 2542924 Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185 ||||||||||| ||||| ||||||| |||||| ||||||| | | |||||||||||| Sbjct 2542925 GGCTCCCTCTCTGGAATTGAACCCTGATTCCCTGTTACCCATGGTCACCATGGTAGGCAC 2542984 Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC-TCAAG 244 | ||||||||||||||||||||||||| |||||| || |||||||| | | || Sbjct 2542985 AGAAAGTACCATCGAAAGTTGATAGGGCAGACATTTGACTGTGTCATCGCCGCCATGGAG 2543044 Query 245 GCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC---GTTGG 299 | | |||||| | | ||||| || ||||||| | || | | || ||| | Sbjct 2543045 G-CGTGCGATAGGCCCGAGGTTATCTAGAGTCACCAAAGCAGCCGGGTGAGCCCGGTTTG 2543103 Query 300 TTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATTAGCT 356 ||||| ||| |||||| | | | || || ||| | | | |||||||||||||| Sbjct 2543104 TTTTTGGTCTGATAAATGTGCGCATCCCCGGAGGTCAGCACTCATCAGCATGTATTAGCT 2543163 Query 357 CTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACTGATT 414 ||||||||||||| |||||||| ||| | || | | |||| || |||||||||| Sbjct 2543164 CTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCGACCAAAGGAAGCATAACTGATT 2543223 Query 415 TAATGAGCCATTCGCAGTTTCACTGT-ATAG-ATTGCTTATACTTAGACATGCATGGCTT 472 |||||||||||||||||||||||||| || || | |||||||||||||||||||| Sbjct 2543224 TAATGAGCCATTCGCAGTTTCACTGTCCCAGCCATG--TGTACTTAGACATGCATGGCTT 2543281 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||||||||||||||||| |||||||||| Sbjct 2543282 AATTTTTGAGACAAGCATATG-CTACTGGCAG 2543312 >seq1522 Length=189187 Score = 282 bits (312), Expect = 1e-73 Identities = 386/520 (74%), Gaps = 32/520 (6%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAG-ACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTA-CC 59 ||||||||||||||||||| || ||| || |||||| ||||| ||||||||| || Sbjct 129639 TACTCATTCCAATTACAAGGACTTGAAACAGTCCTGTAATGTTATTTTTTGTCACTATCC 129698 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | || | | | ||| ||||||||||| | ||||||||||||||||||||||| ||||| | Sbjct 129699 TTCCGGGGCCAGGAGTGGGTAATTTGTGTGCCTGCTGCCTTCCTTGGATGTGCTAGCCAT 129758 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 || ||||||||||||||| ||||| |||||| | |||| ||||| | | |||||| | Sbjct 129759 TTTTCAGGCTCCCTCTCCAGAATCAAACCCTGAGTCCCTATTACCAGCAGTCACCATGCT 129818 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| |||||| | | | || | Sbjct 129819 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTTGAGCAAGTCTTTACCACC 129878 Query 240 TCAAGGCCATGCGATTCGT--TAAGTTATTATGAATCACCAAG--GAGCCCCGAAGGGCG 295 || || ||| | ||| || | ||||| | || || | | |||||| | | Sbjct 129879 ACATGG-CATACCATTGGTCAGAGGTTATCA--AAGCAGCTGGGTGAGCCC------GGG 129929 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATT 352 |||| |||| |||| |||||| || | | || || ||| | | | | ||||||||| Sbjct 129930 TTGG-TTTTGATCTGATAAATGCATGCATCCCCAGAGGTCAGTGCTCAATGGCATGTATT 129988 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT---ACT-ATCAAA--TAAACGAT 406 | |||| ||||||||| |||||||| ||| | ||| | | |||||| | ||| | Sbjct 129989 AACTCTGAAATTACCACAGTTATCCAAGTA--ATGGTTGGAGTGATCAAAGGTCAACAAC 130046 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTATACTTAGACATG 464 | ||||||||| |||||| ||||||||||||| || ||| | | ||||||||| Sbjct 130047 AGTTGATTTAATACGCCATTTACAGTTTCACTGTACCAGCCTTG--TGCATTTAGACATG 130104 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||| ||||||||||||||| |||| ||||||| || Sbjct 130105 CATGGCTTGATCTTTGAGACAAGCGTATG-CTACTGGGAG 130143 >seq379 Length=1995076 Score = 277 bits (306), Expect = 5e-72 Identities = 205/238 (86%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 897764 GTACTCATTCCAATTACAGGGCCTCCAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 897705 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 897704 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 897645 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||| |||| ||||||| |||||||||||||| | | |||||||| Sbjct 897644 TTCTCAGGCTCCCTCTCCAGAATTGAACCCTGATTCCCCGTTACCCTTGGTCACCATGGT 897585 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||| | ||||||||||||||||||||||||| ||| ||||| | | |||||| Sbjct 897584 AGGTACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCATCGTCGCCG 897527 Score = 138 bits (152), Expect = 3e-30 Identities = 130/163 (80%), Gaps = 11/163 (7%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATC-AAATAA 401 |||||||||||||||||||||||||| |||||||| ||| | | | | | ||| | Sbjct 897877 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACAGTTGGAGTGACGAAAGGA 897936 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||||||||||||||||||||||||||||||||| | | | ||||||||| Sbjct 897937 ACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGAC 897996 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||| ||||||||||||||||| |||||||||| Sbjct 897997 A--------TTAATATTTGAGACAAGCATATG-CTACTGGCAG 898030 Score = 102 bits (112), Expect = 2e-19 Identities = 120/161 (75%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| | || | |||||||| |||| | ||||| | | ||| | Sbjct 1003432 TACTCATTCCAATTAAAGAGCCTCAAAAGAGTCCTGCGTTGTTATTTTTCATTGCTATTT 1003373 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| ||| | | | |||||||||| | ||||||||||||||| ||||||||| ||| Sbjct 1003372 CCCCAGGTCAGAAGTAGGTAATTTGCACACCTGCTGCCTTCCTTTAATGTGGTAGTTGTT 1003313 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 | |||| ||| ||| |||||| ||| | ||| ||| || Sbjct 1003312 TTTCAGTCTCTGTCTTTGGAATCAAACTGTGATTTCCCATT 1003272 >seq220 Length=2698975 Score = 212 bits (234), Expect = 2e-52 Identities = 183/227 (81%), Gaps = 10/227 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || |||||| ||||||| ||||| | |||||||| Sbjct 1602406 GTACTCATTCCAATTACAGGGCCTTGAAAGAGTCCTGTATTGTTATTTTTCATCACTACC 1602347 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| || |||| ||||||||||| ||||||||||||||||| ||||||||| | || Sbjct 1602346 TCCCCGGGTTGGGAGTGGGTAATTTGTGCGCCTGCTGCCTTCCTCAGATGTGGTACCTGT 1602287 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 || ||||||| ||||||| |||| |||||||||||||| |||| ||||||| Sbjct 1602286 TTTTCAGGCTTCCTCTCCAGAATTAAACCCTAATTCCCCATTAC---------CCATGGT 1602236 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226 |||| | ||||||| ||||||||||||||||| ||||||||| Sbjct 1602235 AGGCACAGAAAGTACCATCAAAAGTTGATAGGGCAGACATTTGAATG 1602189 >seq769 Length=1018780 Score = 179 bits (198), Expect = 1e-42 Identities = 139/163 (85%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401 || ||||||||||||||||||||||| |||||||| ||| | || | | |||| | Sbjct 965459 GCGTGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGTTGGAGCAACCAAAGGA 965518 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||||||||||||||||||||||||||||||||| | || | ||||||||| Sbjct 965519 ACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACTGGCTGTATGTACTTAGAC 965578 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| |||||||||||||||||||||||||| |||||||||| Sbjct 965579 ATGCACGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 965620 >seq90 Length=3931935 Score = 145 bits (160), Expect = 2e-32 Identities = 157/207 (76%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||| |||| | | |||| || ||||||||| ||||||| ||||| Sbjct 1318778 TATTTTTCATCACTACTTCCCTGGATTGGGAGTGAGTAATTTGCATGCCTGCTATCTTCC 1318837 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||| || ||| | ||| |||||||||| || |||| ||||||| |||||| || | Sbjct 1318838 TTGGATATGCTAGGCTTTT-TCAGGCTCCCATTCTAGAATTGAACCCTGATTCCCTGTCA 1318896 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 || |||| |||||||||||| | |||||| ||||||||||| |||||| ||| Sbjct 1318897 CCTGTTGTCACCATGGTAGGCACAGAAAGTACCATTGAAAGTTGATAAGGCAGACATTCA 1318956 Query 223 AATGAACCATCGCCGGCTCAAGGCCAT 249 ||||| ||| || | | || || ||| Sbjct 1318957 AATGAGTCATTGCTGCCACAGGGGCAT 1318983 >seq97 Length=3855401 Score = 136 bits (150), Expect = 1e-29 Identities = 143/187 (76%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 24 CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATT 83 |||| ||| || || | ||||| | ||| ||| |||| |||||| ||||| ||| Sbjct 2487731 CAAACGAGTCCCGTGTTGTTATTTTTAATCATTACTTCCCTAGGTCGGGCATGGGTCATT 2487790 Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGG-TAGCCGTTTCTCAGGCTCCCTCTCCGGAAT 142 ||| |||||||||||||||||||||||| |||| ||| | ||||||||| ||| | || Sbjct 2487791 TGCATGCCTGCTGCCTTCCTTGGATGTGGTTAGCTATTTTTTAGGCTCCCTTTCCAGGAT 2487850 Query 143 CGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAA 202 | |||||| |||||| |||||| || | ||||| ||||| || |||||| |||| Sbjct 2487851 CAAACCCTGATTCCCTGTTACCTGTGGTCACCATATTAGGCACATAAAGTACCATTGAAA 2487910 Query 203 GTTGATA 209 ||||||| Sbjct 2487911 GTTGATA 2487917 >seq552 Length=1446633 Score = 131 bits (144), Expect = 5e-28 Identities = 104/124 (84%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | || |||||||| || | ||||| | |||||||| Sbjct 1266799 GTACTCATTCCAATTACAGGGCCTCGAACGAGCCCTGCATTATTATTTCTCATCACTACC 1266858 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| |||||||||| || | || ||||||||||||||| ||||||| | Sbjct 1266859 TCCCCGAGTCGGGAGCGGGTAATTTGTGCACGTGTTGCCTTCCTTGGATGCGGTAGCCAT 1266918 Query 120 TTCT 123 |||| Sbjct 1266919 TTCT 1266922 >seq1158 Length=502201 Score = 125 bits (138), Expect = 2e-26 Identities = 164/228 (72%), Gaps = 13/228 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||| ||||||| | ||||||| || ||| ||||| | |||||||| Sbjct 403889 GTACTCATTCCAGTTACAAGGTCTCAAAAGAATTCTCTATTGTTATTTTTCATCACTACC 403830 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| || ||| |||||||||||| | ||| |||| ||| ||||||||||||||| | Sbjct 403829 ACCCCAGGTTCGGAATGGGTAATTTGCCCACCTACTGCTTTCTTTGGATGTGGTAGCCAT 403770 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||| || |||||| ||| | |||||||| ||||| || | |||||| | Sbjct 403769 TTCCCA------------GGAATCAAACTCCAATTCCCCATTACCTGTGGTCACCATGTT 403722 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 ||| | ||| ||| |||||| ||||| ||| ||| ||||| Sbjct 403721 AGGAACAGAAAGTACTATCAAAAGTTATTAGGGAAGACATTCAAATGA 403674 >seq1526 Length=188672 Score = 113 bits (124), Expect = 1e-22 Identities = 119/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 12 AATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGG 71 ||||||| | || || ||| || ||| ||||| |||| |||| ||||| | || | Sbjct 118328 AATTACAGGGCCTCAA-GAGACCCATATTGTTATTT-TTGTTACTAGCTCCCTGCCTCAG 118385 Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131 || |||||||||| || |||||||| | | ||| |||||| |||| ||||||||||| | Sbjct 118386 GAGTGGGTAATTTATGCACCTGCTGCATACATTGTATGTGGCAGCCATTTCTCAGGCTGC 118445 Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165 |||| | ||||| |||| | ||||||| |||||| Sbjct 118446 CTCTTCAGAATCAAACCTTGATTCCCCATTACCC 118479 >seq365 Length=2040223 Score = 109 bits (120), Expect = 2e-21 Identities = 81/94 (86%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 33 CCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCT 92 ||||||| ||||| | |||||||||| ||| ||| ||| ||||||||||| || ||| Sbjct 1430170 CCTGTAT---TATTTTTCGTCACTACCTGCCCTGGTCAGGAGTGGGTAATTTGAGCACCT 1430114 Query 93 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126 ||||||||||||||||||||||||| |||||||| Sbjct 1430113 GCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAG 1430080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510259276032