Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10]
6,457 sequences; 1,799,143,587 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1826 113 3e-23
seq3 80.6 1e-13
>seq1826
Length=21048
Score = 113 bits (124), Expect = 3e-23
Identities = 95/117 (81%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 789 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 848
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 849 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 905
Score = 100 bits (110), Expect = 2e-19
Identities = 94/117 (80%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| || | || ||| |||| ||| |||| ||||| ||||
Sbjct 8622 GAACCCAAAGACTTTGGTTCC-CGGAAGCTGCCCGGCG-GTCATGGGAATAACGCCGCCG 8679
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 8680 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 8736
>seq3
Length=204416410
Score = 80.6 bits (88), Expect = 1e-13
Identities = 88/117 (75%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| | ||| || | | |||| ||||| | ||
Sbjct 40094980 GAACCCAAAGACTTTGGTTTCCCAGAAGCTGGTCGGAGGGTCATGGGAATAACGCCACCG 40095039
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||| ||| ||||| ||| ||||| |||||||||||||||||||||
Sbjct 40095040 GATCACTAGTCGACATCGTTTATGGTCGGAACTACAACGGTATCTGATCGTCTTCGA 40095096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278383147230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |