Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1826 334 1e-89 seq1 264 2e-68 seq2 233 3e-59 seq70 194 3e-47 seq3 141 2e-31 seq517 122 1e-25 seq130 102 1e-19 seq30 93.3 7e-17 seq5 89.7 9e-16 >seq1826 Length=21048 Score = 334 bits (370), Expect = 1e-89 Identities = 252/294 (86%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||||| ||||||||||||||||||||||||||||| Sbjct 17199 TACTGAGCAGGATTACTAGCGCAACGACGCCTCATCAGTAGGGTAAAACTAACCTGTCTC 17258 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 17259 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 17318 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 17319 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 17378 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 17379 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 17438 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | |||||||| | ||| | |||||| ||| ||||||| Sbjct 17439 TAAAACCCAAAAAGTCAGAAGGATCG-TGAGCCCCGCTTTCACGGTCTGTATTC 17491 >seq1 Length=263920458 Score = 264 bits (292), Expect = 2e-68 Identities = 232/288 (81%), Gaps = 1/288 (0%) Strand=Plus/Plus Query 6 AGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATGAC 64 ||| | ||||| | || ||| | |||||||||||||||||||||||||| |||| || Sbjct 81817155 AGCAGGATTACTAGTGTAACGATGTGTCATCAGTAGGGTAAAACTAACCTGCCTCACCAC 81817214 Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124 |||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||| Sbjct 81817215 GGTCTAAACCCATCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGTGAGTTC 81817274 Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 |||||| ||||||||||||||| ||||| ||| |||||||| | | || |||||||| Sbjct 81817275 TGCTTCACAATGATAGGAAGAGCCAACATCAAAGAATCAAAAAACGATATCACTATGAAC 81817334 Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||| ||||||||||||||||| | |||| |||||||| | |||||| || | ||| Sbjct 81817335 GCTTGGCCGCCACAAGCCAGTTATCACCGTGGAAACTTTTCCGACACCTCCTGCTTAAAA 81817394 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | | | |||||| | ||||| |||||||||| |||||| Sbjct 81817395 CCCAAAAAGTCAGAAGGATTGTGAGGCCCTGCTTTCATGGTCTGTATT 81817442 Score = 215 bits (238), Expect = 9e-54 Identities = 167/197 (85%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||| |||||||||||||||||| || ||||||||| || ||| ||||||||||||| Sbjct 112454355 CAGTAGGATAAAACTAACCTGTCTCACGAGGGTCTAAACTCAACTCGCGTTCCCTATTAG 112454296 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 || ||||||||||||| |||| |||||||||||| |||||||||||||| ||| || Sbjct 112454295 TGAGTGAACAATCCAAAGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGACCTC 112454236 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||| | || |||||| |||||||||| |||| ||||||||||||||||| Sbjct 112454235 AAAGGATCAA----CGACATCGCTACAAACGCTTGGCCGCCA-AAGCCAGTTATCCCTGT 112454181 Query 215 GGTAACTTTTCTGGCAC 231 ||||| |||| || ||| Sbjct 112454180 GGTAAATTTTATGACAC 112454164 Score = 172 bits (190), Expect = 9e-41 Identities = 116/129 (90%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 145369860 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATTCCAGCTCACGTTCCCTA 145369801 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||| Sbjct 145369800 TTAGTGGGTTAACAAACCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 145369741 Query 151 CATCGAAGG 159 || ||||| Sbjct 145369740 CA--GAAGG 145369734 Score = 100 bits (110), Expect = 5e-19 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||| |||| ||| |||| |||| || |||||||||||||||||| Sbjct 73009626 TCATCAGTAGGTTAAA-CTAAGCTGCCTCACAGTGGTCCAACCCCAGCTCACGTTCCCTA 73009684 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||||| |||||||||| |||| ||||||||| || Sbjct 73009685 TTAGTGGGCAAACAATCCAATGCTTGGTGAATTCTGCATC 73009724 >seq2 Length=199619895 Score = 233 bits (258), Expect = 3e-59 Identities = 204/254 (80%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| ||||||||||| || |||||| | | ||||||||| |||||||| |||||| Sbjct 177185334 TCATCAATAGGGTAAAACGAAGCTGTCTAACAATGGTCTAAACTCAGCTCACATTCCCTT 177185275 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| | Sbjct 177185274 TTAGTGGGTGAACAATCCAATGCTTGATAAATTCTGCTTCACAATGATAGGAAGAGCCAA 177185215 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || |||| |||||||||| || |||||||| ||||||||||||||||||||||||| Sbjct 177185214 CACTGAAGAATCAAAAAGCGACAATGCTATGAATGCTTGGCTGCCACAAGCCAGTTATCT 177185155 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| | ||| || |||| | | | ||||||| | | Sbjct 177185154 CTGTGGTAACTTTTCTGTTATCTCCTGCTGAAAATCCATAAAGTCAGAAGGATCACAAAG 177185095 Query 271 CCACACTTTCATGG 284 || ||||||||||| Sbjct 177185094 CCCCACTTTCATGG 177185081 Score = 125 bits (138), Expect = 1e-26 Identities = 122/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 || ||||||||||||||||| |||||||||||| ||| |||||| ||| || |||| Sbjct 159581022 CGCTCATCAGTAGGGTAAAATTAACCTGTCTCAAGACAGTCTAATTGCAGTATACATTCC 159581081 Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 |||| ||| |||||||||||||| ||| ||||||||||| |||||| |||| Sbjct 159581082 CTATCAGTAGGTGAACAATCCAATACTTGGTGAATTCTGCTTTACAGTGATAGTAAGACA 159581141 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 || || |||||| ||||||| | ||| ||||| || Sbjct 159581142 TGAGATGGAAGGAGCAAAAAGTGATGTCACTATGCAC 159581178 >seq70 Length=2112074 Score = 194 bits (214), Expect = 3e-47 Identities = 127/140 (91%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || Sbjct 1039508 TCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCTAATCCCAGCTCACGTTCTTTA 1039449 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||| ||| |||||||||||| |||||||||||| |||||||||||||| || Sbjct 1039448 TTAGTGGGGGAATAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCGGA 1039389 Query 151 CATCGAAGGATCAAAAAGCA 170 |||||||||||||||||||| Sbjct 1039388 CATCGAAGGATCAAAAAGCA 1039369 >seq3 Length=204416410 Score = 141 bits (156), Expect = 2e-31 Identities = 95/106 (90%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 |||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||| Sbjct 70816997 GAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATAGAAGG 70817056 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 |||||||||| |||||||||||||||||| || ||||||||||||| Sbjct 70817057 ATCAAAAAGCGACGTCGCTATGAACGCTTAGCCGCCACAAGCCAGT 70817102 >seq517 Length=281093 Score = 122 bits (134), Expect = 1e-25 Identities = 115/144 (80%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 68 CTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC-AACGCTTACCGAATTCTG 126 |||| |||| |||| ||||| |||| | ||||||||||| ||| ||| ||||||| Sbjct 10326 CTAATCCCAACTCATATTCCCCATTAAAGAGTGAACAATCCAAACACTTGGTGAATTCTA 10385 Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 |||| |||||||||| |||| ||||| ||||||||| |||| | ||| ||| |||||| Sbjct 10386 CTTCACAATGATAGGAA-AGCCAACATCAAAGGATCAATAAGCGATGTCACTAGGAACGC 10444 Query 187 TTGGCTGCCACAAGCCAGTTATCC 210 ||| | |||||| |||||| |||| Sbjct 10445 TTGACCGCCACATGCCAGTCATCC 10468 >seq130 Length=1560128 Score = 102 bits (112), Expect = 1e-19 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| |||| ||||| ||||||||||||||| |||||||||||||| || ||| || Sbjct 870605 TCATCAATAGGTTAAAATTAACCTGTCTCATGAAAGTCTAAACCCAGCTGACATTCTGTA 870664 Query 91 TTAGTGGGTGAACAATCCAAC 111 ||||||||| ||||||||||| Sbjct 870665 TTAGTGGGTCAACAATCCAAC 870685 >seq30 Length=3593707 Score = 93.3 bits (102), Expect = 7e-17 Identities = 88/111 (79%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||||||||||||||||| ||| | | ||||| ||||||||| | || || | Sbjct 1358917 CATCAGTAGGGTAAAACTAACCTGCTTCACAATGATCTAA-CCCAGCTCATGATCTCTGT 1358859 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142 ||| ||| |||||||||||| ||| |||||| ||| | |||||| || Sbjct 1358858 AAGTTGGTAAACAATCCAACGTTTAGTGAATTCAGCTGCACAATGATAAGA 1358808 >seq5 Length=150641573 Score = 89.7 bits (98), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 15/194 (8%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||| |||||| | ||||| | ||| || |||| ||| ||||||| |||||||| Sbjct 37915080 CATCAGTAAGGTAAAGCAAACCTATGTCACAACCGTCTCCACCTAGCTCACATTCCCTAT 37915021 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 || ||||||| |||| |||| ||||| |||| || ||||||||| || Sbjct 37915020 TACTGGGTGAGCAAT-----GCTTGGTGAATTTCACTTCTTACTGTTAGGAAGAGAAAAC 37914966 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA-GCCAGTTATCC 210 | || ||||| ||| | | |||| | |||| ||| || |||| |||||| Sbjct 37914965 ACTAAAAGATCAGAAA---AAG-----ATGAT-GTTTGGTCACCATAAAGCCAATTATCC 37914915 Query 211 CTGTGGTAACTTTT 224 |||||||||||||| Sbjct 37914914 CTGTGGTAACTTTT 37914901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854344831392