Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10]
6,457 sequences; 1,799,143,587 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1826 334 1e-89
seq1 264 2e-68
seq2 233 3e-59
seq70 194 3e-47
seq3 141 2e-31
seq517 122 1e-25
seq130 102 1e-19
seq30 93.3 7e-17
seq5 89.7 9e-16
>seq1826
Length=21048
Score = 334 bits (370), Expect = 1e-89
Identities = 252/294 (86%), Gaps = 2/294 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| | | ||||| |||||||||||||||||||||||||||||
Sbjct 17199 TACTGAGCAGGATTACTAGCGCAACGACGCCTCATCAGTAGGGTAAAACTAACCTGTCTC 17258
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 17259 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 17318
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 17319 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 17378
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 17379 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 17438
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | | |||||||| | ||| | |||||| ||| |||||||
Sbjct 17439 TAAAACCCAAAAAGTCAGAAGGATCG-TGAGCCCCGCTTTCACGGTCTGTATTC 17491
>seq1
Length=263920458
Score = 264 bits (292), Expect = 2e-68
Identities = 232/288 (81%), Gaps = 1/288 (0%)
Strand=Plus/Plus
Query 6 AGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATGAC 64
||| | ||||| | || ||| | |||||||||||||||||||||||||| |||| ||
Sbjct 81817155 AGCAGGATTACTAGTGTAACGATGTGTCATCAGTAGGGTAAAACTAACCTGCCTCACCAC 81817214
Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124
|||||||||||| |||||||||||||||||||||||||||||||||| ||| || |||
Sbjct 81817215 GGTCTAAACCCATCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGTGAGTTC 81817274
Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184
|||||| ||||||||||||||| ||||| ||| |||||||| | | || ||||||||
Sbjct 81817275 TGCTTCACAATGATAGGAAGAGCCAACATCAAAGAATCAAAAAACGATATCACTATGAAC 81817334
Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||| ||||||||||||||||| | |||| |||||||| | |||||| || | |||
Sbjct 81817335 GCTTGGCCGCCACAAGCCAGTTATCACCGTGGAAACTTTTCCGACACCTCCTGCTTAAAA 81817394
Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| | | |||||| | ||||| |||||||||| ||||||
Sbjct 81817395 CCCAAAAAGTCAGAAGGATTGTGAGGCCCTGCTTTCATGGTCTGTATT 81817442
Score = 215 bits (238), Expect = 9e-54
Identities = 167/197 (85%), Gaps = 5/197 (3%)
Strand=Plus/Minus
Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94
||||||| |||||||||||||||||| || ||||||||| || ||| |||||||||||||
Sbjct 112454355 CAGTAGGATAAAACTAACCTGTCTCACGAGGGTCTAAACTCAACTCGCGTTCCCTATTAG 112454296
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
|| ||||||||||||| |||| |||||||||||| |||||||||||||| ||| ||
Sbjct 112454295 TGAGTGAACAATCCAAAGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGACCTC 112454236
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
||||||||| | || |||||| |||||||||| |||| |||||||||||||||||
Sbjct 112454235 AAAGGATCAA----CGACATCGCTACAAACGCTTGGCCGCCA-AAGCCAGTTATCCCTGT 112454181
Query 215 GGTAACTTTTCTGGCAC 231
||||| |||| || |||
Sbjct 112454180 GGTAAATTTTATGACAC 112454164
Score = 172 bits (190), Expect = 9e-41
Identities = 116/129 (90%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 145369860 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATTCCAGCTCACGTTCCCTA 145369801
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||
Sbjct 145369800 TTAGTGGGTTAACAAACCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 145369741
Query 151 CATCGAAGG 159
|| |||||
Sbjct 145369740 CA--GAAGG 145369734
Score = 100 bits (110), Expect = 5e-19
Identities = 83/100 (83%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||| |||| ||| |||| |||| || ||||||||||||||||||
Sbjct 73009626 TCATCAGTAGGTTAAA-CTAAGCTGCCTCACAGTGGTCCAACCCCAGCTCACGTTCCCTA 73009684
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130
|||||||| |||||||||| |||| ||||||||| ||
Sbjct 73009685 TTAGTGGGCAAACAATCCAATGCTTGGTGAATTCTGCATC 73009724
>seq2
Length=199619895
Score = 233 bits (258), Expect = 3e-59
Identities = 204/254 (80%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||| ||||||||||| || |||||| | | ||||||||| |||||||| ||||||
Sbjct 177185334 TCATCAATAGGGTAAAACGAAGCTGTCTAACAATGGTCTAAACTCAGCTCACATTCCCTT 177185275
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |
Sbjct 177185274 TTAGTGGGTGAACAATCCAATGCTTGATAAATTCTGCTTCACAATGATAGGAAGAGCCAA 177185215
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|| |||| |||||||||| || |||||||| |||||||||||||||||||||||||
Sbjct 177185214 CACTGAAGAATCAAAAAGCGACAATGCTATGAATGCTTGGCTGCCACAAGCCAGTTATCT 177185155
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||| | ||| || |||| | | | ||||||| | |
Sbjct 177185154 CTGTGGTAACTTTTCTGTTATCTCCTGCTGAAAATCCATAAAGTCAGAAGGATCACAAAG 177185095
Query 271 CCACACTTTCATGG 284
|| |||||||||||
Sbjct 177185094 CCCCACTTTCATGG 177185081
Score = 125 bits (138), Expect = 1e-26
Identities = 122/157 (78%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| ||||||||||||||||| |||||||||||| ||| |||||| ||| || ||||
Sbjct 159581022 CGCTCATCAGTAGGGTAAAATTAACCTGTCTCAAGACAGTCTAATTGCAGTATACATTCC 159581081
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|||| ||| |||||||||||||| ||| ||||||||||| |||||| ||||
Sbjct 159581082 CTATCAGTAGGTGAACAATCCAATACTTGGTGAATTCTGCTTTACAGTGATAGTAAGACA 159581141
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184
|| || |||||| ||||||| | ||| ||||| ||
Sbjct 159581142 TGAGATGGAAGGAGCAAAAAGTGATGTCACTATGCAC 159581178
>seq70
Length=2112074
Score = 194 bits (214), Expect = 3e-47
Identities = 127/140 (91%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||
Sbjct 1039508 TCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCTAATCCCAGCTCACGTTCTTTA 1039449
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||||| ||| |||||||||||| |||||||||||| |||||||||||||| ||
Sbjct 1039448 TTAGTGGGGGAATAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCGGA 1039389
Query 151 CATCGAAGGATCAAAAAGCA 170
||||||||||||||||||||
Sbjct 1039388 CATCGAAGGATCAAAAAGCA 1039369
>seq3
Length=204416410
Score = 141 bits (156), Expect = 2e-31
Identities = 95/106 (90%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159
|||||||||||| ||| |||||||||||| |||||||||||||||||||| |||||
Sbjct 70816997 GAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATAGAAGG 70817056
Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205
|||||||||| |||||||||||||||||| || |||||||||||||
Sbjct 70817057 ATCAAAAAGCGACGTCGCTATGAACGCTTAGCCGCCACAAGCCAGT 70817102
>seq517
Length=281093
Score = 122 bits (134), Expect = 1e-25
Identities = 115/144 (80%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 68 CTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC-AACGCTTACCGAATTCTG 126
|||| |||| |||| ||||| |||| | ||||||||||| ||| ||| |||||||
Sbjct 10326 CTAATCCCAACTCATATTCCCCATTAAAGAGTGAACAATCCAAACACTTGGTGAATTCTA 10385
Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186
|||| |||||||||| |||| ||||| ||||||||| |||| | ||| ||| ||||||
Sbjct 10386 CTTCACAATGATAGGAA-AGCCAACATCAAAGGATCAATAAGCGATGTCACTAGGAACGC 10444
Query 187 TTGGCTGCCACAAGCCAGTTATCC 210
||| | |||||| |||||| ||||
Sbjct 10445 TTGACCGCCACATGCCAGTCATCC 10468
>seq130
Length=1560128
Score = 102 bits (112), Expect = 1e-19
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||| |||| ||||| ||||||||||||||| |||||||||||||| || ||| ||
Sbjct 870605 TCATCAATAGGTTAAAATTAACCTGTCTCATGAAAGTCTAAACCCAGCTGACATTCTGTA 870664
Query 91 TTAGTGGGTGAACAATCCAAC 111
||||||||| |||||||||||
Sbjct 870665 TTAGTGGGTCAACAATCCAAC 870685
>seq30
Length=3593707
Score = 93.3 bits (102), Expect = 7e-17
Identities = 88/111 (79%), Gaps = 1/111 (1%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|||||||||||||||||||||||| ||| | | ||||| ||||||||| | || || |
Sbjct 1358917 CATCAGTAGGGTAAAACTAACCTGCTTCACAATGATCTAA-CCCAGCTCATGATCTCTGT 1358859
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142
||| ||| |||||||||||| ||| |||||| ||| | |||||| ||
Sbjct 1358858 AAGTTGGTAAACAATCCAACGTTTAGTGAATTCAGCTGCACAATGATAAGA 1358808
>seq5
Length=150641573
Score = 89.7 bits (98), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 15/194 (8%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|||||||| |||||| | ||||| | ||| || |||| ||| ||||||| ||||||||
Sbjct 37915080 CATCAGTAAGGTAAAGCAAACCTATGTCACAACCGTCTCCACCTAGCTCACATTCCCTAT 37915021
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
|| ||||||| |||| |||| ||||| |||| || ||||||||| ||
Sbjct 37915020 TACTGGGTGAGCAAT-----GCTTGGTGAATTTCACTTCTTACTGTTAGGAAGAGAAAAC 37914966
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA-GCCAGTTATCC 210
| || ||||| ||| | | |||| | |||| ||| || |||| ||||||
Sbjct 37914965 ACTAAAAGATCAGAAA---AAG-----ATGAT-GTTTGGTCACCATAAAGCCAATTATCC 37914915
Query 211 CTGTGGTAACTTTT 224
||||||||||||||
Sbjct 37914914 CTGTGGTAACTTTT 37914901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854344831392
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