Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1826 457 3e-126 seq5 127 6e-27 seq8 86.0 2e-14 seq16 80.6 8e-13 >seq1826 Length=21048 Score = 457 bits (506), Expect = 3e-126 Identities = 415/514 (81%), Gaps = 14/514 (3%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 1381 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 1440 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1441 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 1500 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| Sbjct 1501 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAG 1560 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | ||||||||||||||||||||||||| ||| ||||| | |||||| | | Sbjct 1561 GCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCGTCGTCGCCGCCAC 1620 Query 242 AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----G 295 || | |||||| | | ||||| || ||||||| | | || | | || | Sbjct 1621 GGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCGAGCCCGGG 1680 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATT 352 |||| |||| ||| |||||| ||| | | || || ||| | | | | ||||||||| Sbjct 1681 TTGG-TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTATT 1739 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||| |||||||| | | | || | | |||| ||| |||||| Sbjct 1740 AGCTCTAGAATTACCACAGTTATCCAAGGAACGGGGGGAGCGACCAAAGGAACCATAACT 1799 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||||||||||||||||||||||||||||||| | | | |||||||||||||||||| Sbjct 1800 GATTTAATGAGCCATTCGCAGTTTCACTGTAACGCCCGTGTGTACTTAGACATGCATGGC 1859 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| |||||||||| Sbjct 1860 TTAATCTTTGAGACAAGCATATG-CTACTGGCAG 1892 Score = 453 bits (502), Expect = 3e-125 Identities = 415/514 (81%), Gaps = 15/514 (3%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 9206 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 9265 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9266 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 9325 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| Sbjct 9326 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAG 9385 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || | ||||||||||||||||||||||||| ||| ||||| | |||||| | | Sbjct 9386 GCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGCGTCGTCGCCGCCAC 9445 Query 242 AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----G 295 || | |||||| | | ||||| || ||||||| | | || | | || | Sbjct 9446 -GGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGCGAGCCCGGG 9504 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATT 352 |||| |||| ||| |||||| ||| | | || || ||| | | | | ||||||||| Sbjct 9505 TTGG-TTTTGGTCTGATAAATGCACGCATCCCCGGAGGTCAGCGCTCGTCGGCATGTATT 9563 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||| |||||||| | | | || | | |||| ||| |||||| Sbjct 9564 AGCTCTAGAATTACCACAGTTATCCAAGGAACGGGGGGAGCGACCAAAGGAACCATAACT 9623 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||||||||||||||||||||||||||||||| | | | |||||||||||||||||| Sbjct 9624 GATTTAATGAGCCATTCGCAGTTTCACTGTAACGCCCGTGTGTACTTAGACATGCATGGC 9683 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| |||||||||| Sbjct 9684 TTAATCTTTGAGACAAGCATATG-CTACTGGCAG 9716 >seq5 Length=150641573 Score = 127 bits (140), Expect = 6e-27 Identities = 89/100 (89%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||||||||||||||||| ||||||||||||| | | |||||||||||| Sbjct 107179670 ATAACTGATTTAATGAGCCATTCACAGTTTCACTGTAATGCCCATGTGTACTTAGACATG 107179611 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| |||||||||| Sbjct 107179610 CATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 107179572 >seq8 Length=3271537 Score = 86.0 bits (94), Expect = 2e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| |||||||||| |||| |||||| |||||||||||||| | | |||||||| Sbjct 2376313 AACCATAACTGATTGAATGGGCCATTTGCAGTTTCACTGTAACACCCGTGTGTACTTAGA 2376372 Query 461 CATGCATGGCTTAATCTTTGAGACA 485 ||||||||||| |||||||||||| Sbjct 2376373 TATGCATGGCTTCATCTTTGAGACA 2376397 >seq16 Length=9143828 Score = 80.6 bits (88), Expect = 8e-13 Identities = 97/132 (73%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 |||||| |||||| |||||| | || ||||||||||||| || || ||| ||||||| Sbjct 7854251 TGCCTTTCTTGGAAGTGGTAATCATTCGTCAGGCTCCCTCTTTGGTATTGAATCCTAATT 7854310 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 | | |||||| | | ||||| | ||| || | |||| ||||||| || ||| | Sbjct 7854311 CTTCATTACCCATGGTCACCATAGAAGGTGCATAAAGTGCCATTGAAAGTTTATGGGGTA 7854370 Query 215 GAAATTTGAATG 226 || |||||| || Sbjct 7854371 GATATTTGACTG 7854382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510302473472