Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anolis_20carolinensis_20[refseq_20GCF_5F000090745.1_202011-01-10] 6,457 sequences; 1,799,143,587 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq514 116 3e-21 seq1 95.1 1e-14 seq4 87.8 1e-12 >seq514 Length=269024 Score = 116 bits (128), Expect = 3e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| || || |||||||| || || ||||| ||||| |||| ||||| || Sbjct 181442 GGTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGGTCCCCAGGTTCTGCTG 181383 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| | ||||| | || ||||| | |||||||||||||||||||||| || Sbjct 181382 GTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGAGTGCCGGTCTCAGTCTG 181323 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||| |||||||||| ||| || Sbjct 181322 GGACTCGATGATGGCGTACCAGAG 181299 >seq1 Length=263920458 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || | ||||| | || || || |||||||| |||||||||| Sbjct 148009468 TGGAGCGATTCAGCCAAGAAATCCAAGTCACAGAAGCTCGCTGTTTCTATGGCTTCCAGA 148009409 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 |||||||||| || |||| ||||| ||||||||| | || || ||||| ||||||| Sbjct 148009408 TTGCCATGGAAAACATCCATTCGGAAATGTACAGTTTACTTATTGATACTTACATCA 148009352 >seq4 Length=156502444 Score = 87.8 bits (96), Expect = 1e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 ||||||| || ||||| |||||||| | ||||| ||||||||||| ||||| |||| Sbjct 14018025 TGGAACGCTTTAGTCAGGAAGTGCAAGTCCCAGAGGCTCGTTGTTTCTATGGCTTTCAGA 14018084 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | || || ||||| || || |||||||||||| | | || || || ||||||| || Sbjct 14018085 TCCTAATCGAAAATGTTCATTCAGAGATGTACAGTTTATTAATAGACACTTACATCAAGG 14018144 Query 61376 A 61376 | Sbjct 14018145 A 14018145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397536713510480