Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03] 286,620 sequences; 1,931,078,847 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq265194 87.8 1e-15 >seq265194 Length=496 Score = 87.8 bits (96), Expect = 1e-15 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| |||| | |||| ||| |||| ||||| || Sbjct 306 GAACCCAAAGACTTTGGTTTCCCGTAGGCTGCCCGGCGGGTCATGGGAATAACGCTGCAA 365 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCT 113 |||| | | ||||||||||||| ||| || |||||||||||||||||||| Sbjct 366 GATCGCGAATCGGCATAGTTTATGGTCGGAACGACGACGGTATCTGATCGTCT 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277651921800