Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apalone_20spinifera_20[genbank_20GCA_5F000385615.1_202013-05-03]
286,620 sequences; 1,931,078,847 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq285514 125 3e-27
seq285833 114 6e-24
seq31212 107 9e-22
seq77636 105 3e-21
>seq285514
Length=2680515
Score = 125 bits (138), Expect = 3e-27
Identities = 89/102 (87%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||| ||| || ||||||||||||||||||| || |
Sbjct 634279 GGAAAAGAAACTAACCAGGATTCCCTCATTAATGGTGAGTGAACAGGGAAGAGCCTAGTG 634220
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|| |||||| | ||| | |||||| |||||| ||||||| ||
Sbjct 634219 CCAAATCCCTGTCCCACAGTGGGGTGCGGGAAATGTGGCATA 634178
>seq285833
Length=1095036
Score = 114 bits (126), Expect = 6e-24
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||
Sbjct 600217 GGAAAAGAAACTAACCAGGATTCCCTCAGCAACGGTGAGTGAACAGAGACGAGCCCAGCG 600276
Query 61 CCGAATCCCCGCCCCG 76
||||||||||| ||||
Sbjct 600277 CCGAATCCCCGTCCCG 600292
>seq31212
Length=210
Score = 107 bits (118), Expect = 9e-22
Identities = 59/59 (100%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 210
>seq77636
Length=249
Score = 105 bits (116), Expect = 3e-21
Identities = 64/68 (94%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 18 GGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGC 77
|| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 175 GGTTTCCCTCAGTAACGGCGAGCGAACAGGGAAGAGCCCAGCGCCGAATCCCCATCCCGC 234
Query 78 GGTGGGGC 85
||||||||
Sbjct 235 GGTGGGGC 242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 229780900800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |