Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq94156 122 4e-26 seq73500 104 1e-20 seq68277 78.8 4e-13 >seq94156 Length=1513417 Score = 122 bits (134), Expect = 4e-26 Identities = 88/102 (86%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||| | Sbjct 100488 GGAAAAAAAACTAATTAGGATTCCTGCAGTAATGGCGAGTGAACAGGGAAGAGCCCAGTG 100547 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||| || |||||||||| ||||| ||||||| || Sbjct 100548 ATGAATCCCCGTCCTGCGGTGGGGCACGGGAAATGTGGCATA 100589 >seq73500 Length=2906579 Score = 104 bits (114), Expect = 1e-20 Identities = 62/65 (95%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 38 AGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTG 97 |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| Sbjct 2288919 AGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGTCCCGCGGTGGGGCGTGGGAAATGTG 2288978 Query 98 GCGTA 102 ||||| Sbjct 2288979 GCGTA 2288983 >seq68277 Length=1803738 Score = 78.8 bits (86), Expect = 4e-13 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG 53 ||||| |||||||||||||| |||||||||||| ||||| ||||||||||||| Sbjct 121535 GGAAACGAAACTAACCAGGAGTCCCTCAGTAACCGCGAGGGAACAGGGAAGAG 121587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230097550320