Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq48951 77.0 2e-12 seq84050 75.2 7e-12 >seq48951 Length=15760405 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || |||||| ||||||||||| ||||||||||||||||||| Sbjct 9961724 CTCACTAAACCATC-CAATCTGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 9961667 Query 109 TAATACAACGCAAGCT 124 |||| |||| | |||| Sbjct 9961666 TAAT-CAACACGAGCT 9961652 >seq84050 Length=655544 Score = 75.2 bits (82), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| |||| || || ||||| |||||| |||| ||||||||||||||||||| | Sbjct 99751 TCACTAAACCATC-CAATCAGTAGTC-GCGACGCGCGGTGTGTACAAAGGGCAGGGACTT 99808 Query 110 AATACAACGCAAGCT 124 ||| ||||||||||| Sbjct 99809 AAT-CAACGCAAGCT 99822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300405135140