Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq90049 100 3e-19 seq61613 100 3e-19 >seq90049 Length=1965753 Score = 100 bits (110), Expect = 3e-19 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGG 71 ||||||||||||||||||||| ||||||||||||| |||| |||||| | | || Sbjct 1827268 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGTTGCCGGAATACTCCAGCTAGG 1827327 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||| ||||||||| | |||||||||||||| ||||| Sbjct 1827328 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT 1827365 >seq61613 Length=2114478 Score = 100 bits (110), Expect = 3e-19 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGG 71 ||||||||||||||||||||| ||||||||||||| |||| |||||| | | || Sbjct 459860 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGTTGCCGGAATACTCCAGCTAGG 459801 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||| ||||||||| | |||||||||||||| ||||| Sbjct 459800 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT 459763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511305485920