Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chelonia_20mydas_20[refseq_20GCF_5F000344595.1_202013-03-18] 140,023 sequences; 2,208,410,377 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq123362 116 2e-20 >seq123362 Length=217665 Score = 116 bits (128), Expect = 2e-20 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| |||||| || ||||| ||||||| ||| ||||| ||||||| Sbjct 111925 CTCCTTGAGACGGGGCACGCCCAGCGTGACGTTTTTGGCCGAGACACCGGCGTAGTGGAA 111984 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | ||||||| ||| ||| ||||||||| | ||||| |||| ||| ||| || Sbjct 111985 GGTGTTCAGGGTCATCTGGGTGGCGGGCTCGCCCAGCGACTGGGCCGCCAGGGCGCCCAC 112044 Query 349204 CATCTCGCCGGG 349215 ||||||||| || Sbjct 112045 CATCTCGCCCGG 112056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2080907862389354