Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq78549 176 2e-42 seq30189 176 2e-42 seq1 170 9e-41 seq416 143 1e-32 seq3 140 1e-31 seq78555 75.2 5e-12 >seq78549 Length=11360908 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8775603 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 8775544 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| ||||||||||||||||||| |||||||||| Sbjct 8775543 CCGAATCCCCGTCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 8775502 >seq30189 Length=961 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 392 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| ||||||||||||||||||| |||||||||| Sbjct 393 CCGAATCCCCGTCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 434 >seq1 Length=77392008 Score = 170 bits (188), Expect = 9e-41 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11584287 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 11584228 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| |||| |||||||||||||| |||||||||| Sbjct 11584227 CCGAATCCCCGTCCCGTGGTGGGGCGCGGGAAATGTGGCGTA 11584186 >seq416 Length=445439 Score = 143 bits (158), Expect = 1e-32 Identities = 93/102 (91%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 294145 GGAAAAGAAACATACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 294204 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| ||| || | |||||||| |||||||||| Sbjct 294205 CCGAATCCCCGTCCCATGGAGACGCGCGGGAAATGTGGCGTA 294246 >seq3 Length=75876001 Score = 140 bits (154), Expect = 1e-31 Identities = 89/97 (92%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct 75738917 GGAAAAGAAACTAATCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAGACCCCAGCG 75738858 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTG 97 || |||||||| || ||||||||||| |||| ||||| Sbjct 75738857 CCAAATCCCCGTCCTGCGGTGGGGCGTGGGAAATGTG 75738821 >seq78555 Length=30347469 Score = 75.2 bits (82), Expect = 5e-12 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 52 AGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||| |||||||| |||| ||||||||||||||||||| |||||||||| Sbjct 23450453 AGCCCACCGCCGAATACCCGTCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 23450403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230230234800