Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq9502 324 2e-86 seq72 309 5e-82 seq2 293 4e-77 seq75395 289 5e-76 seq431 289 5e-76 seq244 282 7e-74 seq43 232 1e-58 seq78544 224 2e-56 seq78552 223 6e-56 seq6186 223 6e-56 seq78590 221 2e-55 seq78576 199 7e-49 seq67905 188 1e-45 seq222 185 1e-44 seq86 170 3e-40 seq8 170 3e-40 seq47136 165 1e-38 seq461 149 1e-33 seq90 143 5e-32 seq6 111 3e-22 seq9272 84.2 4e-14 >seq9502 Length=473 Score = 324 bits (358), Expect = 2e-86 Identities = 224/254 (88%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGT 99 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 254 GGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGT 195 Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 194 GAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGG 135 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 134 ATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAA 75 Query 220 CTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||||| |||||| || | ||| | | | |||||||| ||||| | |||| Sbjct 74 CTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTT 15 Query 280 CATGGTTTGTATTC 293 || ||| ||||||| Sbjct 14 CACGGTCTGTATTC 1 >seq72 Length=5454768 Score = 309 bits (342), Expect = 5e-82 Identities = 225/260 (87%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 2742811 GTAGGGTAAAACTAACCTGTCTCGTGACGGTCTAATCCCAGCTCACGTTCCCTATTAGTG 2742870 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| Sbjct 2742871 GGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCAACATCGA 2742930 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| Sbjct 2742931 AGGATCAAAAAGCGACATCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGG 2742990 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTC--GAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||| |||||| || | ||| | | | | |||||||| ||||| | Sbjct 2742991 TAACTTTTCTGACACCTCCTGCTTAAAACCCCAAAAAAGTCAGAAGGATCGTGAGGCCCC 2743050 Query 275 ACTTTCATGGTTTGTATTCA 294 |||||| | | |||||||| Sbjct 2743051 GCTTTCACGATCTGTATTCA 2743070 >seq2 Length=68452538 Score = 293 bits (324), Expect = 4e-77 Identities = 224/264 (85%), Gaps = 1/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct 11248385 TCATCAGTAGGGTAAAACTAACCTGTTTCATGATGGTCTAAACCCAG-TCACGTTCCCTA 11248327 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| Sbjct 11248326 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGTTAGGAAGAGCCGA 11248267 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || ||||||||||||||| | || |||||||||||||||| ||||||||||||||||| Sbjct 11248266 CACTGAAGGATCAAAAAGCGATGTTGCTATGAACGCTTGGCCACCACAAGCCAGTTATCC 11248207 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | |||||| | ||| Sbjct 11248206 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAATCAGAAGGATGGTGAGG 11248147 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || | |||||| ||| |||||||| Sbjct 11248146 CCCCGCTTTCACGGTCTGTATTCA 11248123 Score = 84.2 bits (92), Expect = 4e-14 Identities = 98/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 40 GGGTAAAACTAACCTGTCTCATGA-CGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 ||| ||||| ||| || | ||| ||||| ||||||||||||||||||| ||||| || Sbjct 38470596 GGGGAAAACAAACATGCCC--TGAGCGGTCGAAACCCAGCTCACGTTCCCCATTAGCTGG 38470653 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 ||||||| ||||||||| || | ||| ||| || ||||| ||| |||| || | Sbjct 38470654 TGAACAAGCCAACGCTTGATGAGCTGTGCCTCGCAGGGAGAGGAAAAGCTGACACCGGCG 38470713 Query 159 GATCAAAAAG 168 |||| || || Sbjct 38470714 GATCCAAGAG 38470723 >seq75395 Length=510 Score = 289 bits (320), Expect = 5e-76 Identities = 219/253 (87%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 45 AAACTAACC-TGTCTC-ATGACGGTCTAAACCCAGCTCA-CGTTCCCTATTAGTGGGTGA 101 ||||||||| |||||| | |||||||||||||||||||| |||||||||||||||||||| Sbjct 1 AAACTAACCCTGTCTCTACGACGGTCTAAACCCAGCTCAACGTTCCCTATTAGTGGGTGA 60 Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 61 ACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGAT 120 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 121 C-AAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACT 179 Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||| |||||| || | ||| | | | |||||||| ||||| | |||||| Sbjct 180 TTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCA 239 Query 282 TGGTTTGTATTCA 294 ||| |||||||| Sbjct 240 CGGTCTGTATTCA 252 >seq431 Length=435080 Score = 289 bits (320), Expect = 5e-76 Identities = 242/295 (82%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||| ||||||||||||||||| Sbjct 193478 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGATAAAACTAACCTGTCTC 193537 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 193538 ATGACCATCTAAACCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 193597 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||||||| ||||||| ||| ||||||||| |||| || | |||| Sbjct 193598 AATTCTGCTTCACAATGATAGTAAGAGCCAACACTGAAGGATCAGAAAGTGACATTGCTA 193657 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||| |||| |||||||||||||||||||||||||| |||||| || Sbjct 193658 TGAACGCTTGGCAGCCTCAAGGCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 193717 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | | ||||||| ||||| ||||| |||||| |||||||| Sbjct 193718 TAAAACCCCAAAAGTCAGAAGGATCATGAGGCCCCACTTCCATGGTCTGTATTCA 193772 Score = 145 bits (160), Expect = 1e-32 Identities = 99/110 (90%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 5272 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 5331 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 109 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5332 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 5381 >seq244 Length=1272590 Score = 282 bits (312), Expect = 7e-74 Identities = 216/256 (84%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 ||||||||| ||||| |||||| ||| |||||| |||||||||||||||||||||||||| Sbjct 953644 AGGGTAAAAATAACCAGTCTCACGACAGTCTAATCCCAGCTCACGTTCCCTATTAGTGGG 953703 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 ||||||||||||| ||| |||||||| ||| |||||||||||||| |||||||||| Sbjct 953704 TGAACAATCCAACACTTGGTGAATTCTGTTTCACAATGATAGGAAGAGCTGACATCGAAG 953763 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 953764 GATCAAAAAGCGATGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTTTGGTA 953823 Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTT 278 ||||||||| |||||| || | ||| | | | |||||| | ||||| | ||| Sbjct 953824 ACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATTGTGAGGCCCCGCTT 953883 Query 279 TCATGGTTTGTATTCA 294 ||| ||| |||||||| Sbjct 953884 TCACGGTCTGTATTCA 953899 >seq43 Length=7243934 Score = 232 bits (256), Expect = 1e-58 Identities = 212/265 (80%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| | Sbjct 4438593 TCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCTAAACCTAGGGCACATTCCTGA 4438652 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||| ||| |||| |||| ||| ||||||| || | |||||||||| | Sbjct 4438653 TTAGTGGGTGAGCAAGCCAATGCTTGGTGAAGGCTGCTTCTCAATAACAGGAAGAGCCAA 4438712 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| ||| |||||||||| || | ||||||||| |||||||||||||||||| | |||| Sbjct 4438713 CATCAAAGAATCAAAAAGCGACATTGCTATGAACTCTTGGCTGCCACAAGCCAATCATCC 4438772 Query 211 CTGTGGTAACTTTTCTGGCACC-TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 ||||||||||||||||| |||| |||| | | ||| | | | | || | || || Sbjct 4438773 CTGTGGTAACTTTTCTGACACCTTCTA-CTTAAAACCCCAAAAGTCAGAATGTTCATGAG 4438831 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 ||| |||||| ||| |||||||| Sbjct 4438832 GCCTGGCTTTCAAGGTCTGTATTCA 4438856 Score = 111 bits (122), Expect = 3e-22 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||| ||||||||||||| || | ||||| ||||||| |||||||||||||||||||||| Sbjct 623645 AAGAATCAAAAAGCAACATCACCATGAATGCTTGGCCACCACAAGCCAGTTATCCCTGTG 623586 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 | |||||||||| |||||| ||| | ||| | | | | ||| ||| ||||| Sbjct 623585 GCAACTTTTCTGACACCTCCAGCTTAAAACCCCAAAAGTCAGAAGAATCATGAGGCCCTG 623526 Query 276 CTTTCATGGTTTGTATTCA 294 |||||| | | |||||||| Sbjct 623525 CTTTCACGCTCTGTATTCA 623507 >seq78544 Length=15366631 Score = 224 bits (248), Expect = 2e-56 Identities = 191/233 (82%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| | ||||| |||| | | | ||||||||||| |||||||||| | |||| Sbjct 9937206 TACTGAGCAGGATTACTATTGCAG--AAGAACATCAGTAGGG-AAAACTAACCAGCCTCA 9937262 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | ||||||||||||||||| ||| | ||||| ||||||||| |||||| |||| || Sbjct 9937263 CAATGGTCTAAACCCAGCTCATGTTTCATATTATTGGGTGAACTATCCAATGCTTGGTGA 9937322 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||| ||||| ||||||| |||||| |||||| ||||||||||||||| | | | ||| Sbjct 9937323 ATTCAGCTTCACAATGATAGTAAGAGCTGACATCAAAGGATCAAAAAGCATCATAGTTAT 9937382 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 ||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct 9937383 GAATGCTTAGCTGCCACAAACCAATTATCCCTGTGGTAACTTTTCTGACACCT 9937435 >seq78552 Length=9794171 Score = 223 bits (246), Expect = 6e-56 Identities = 228/295 (77%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 ||| |||| | ||||| |||| ||| |||||||||| ||||||||||||||||| Sbjct 2396803 TACAAAGCAGGATTACTATTGCAATGACACATCATCAGTAGACTAAAACTAACCTGTCTC 2396744 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 ||| | ||||||||||| ||| | ||||||||||||||||||| ||||||| || Sbjct 2396743 ATGGCAGTCTAAACCCAACTCGCATTCCCTATTAGTGGGTGAATAATCCAATAGTTGGTA 2396684 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||| ||||||||||| ||| ||||| |||||| | | || |||| Sbjct 2396683 AATTCTGCTTCACAATGTTAGGAAGAGCCAGCATTGAAGGCTCAAAATACCATGTTGCTA 2396624 Query 180 TGAACGCTT-GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||| |||| || || ||||||||||||||||||||||||||||||||| |||||| || Sbjct 2396623 TGAATGCTTGGGATGTCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGC 2396564 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| || | | ||| ||| ||||| |||||| || ||||||| Sbjct 2396563 TTAAAACCCAGAAAGCCAGAAGAATCACGAGGCCCTGCTTTCACAGTCTGTATTC 2396509 >seq6186 Length=1201 Score = 223 bits (246), Expect = 6e-56 Identities = 204/258 (79%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||| ||||| |||| |||| | |||| |||||||||||||||||||| ||||| | Sbjct 1150 GTAGGGAAAAACAAACCAGTCTAAAGACGATCTAAACCCAGCTCACGTTCTCTATTCGCA 1091 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 | |||| ||||||||| | |||||||||||| ||||||||| |||||||||||| Sbjct 1090 AGGGAACCATCCAACGCCTGGTGAATTCTGCTTCACAATGATAGGATTAGCCGACATCGA 1031 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 |||| ||| | | ||||||||||||||||||||| ||||||||||||| || ||| ||| Sbjct 1030 AGGAACAAGTACCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTGATGCCTTTGG 971 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 ||||||||| |||||| || | ||| | | | |||||||| ||||| | | Sbjct 970 CCACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGC 911 Query 277 TTTCATGGTTTGTATTCA 294 ||||| ||| |||||||| Sbjct 910 TTTCACGGTCTGTATTCA 893 >seq78590 Length=6954379 Score = 221 bits (244), Expect = 2e-55 Identities = 164/192 (85%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101 ||||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 6535036 GTAAAACTAACCTGTCTCACAACAGTTGAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 6535095 Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 || ||||||| ||| ||||||||| || |||||||||||||| | || ||||| | Sbjct 6535096 ACCATCCAACACTTGGTGAATTCTGCATCACAGTGATAGGAAGAGCCAATATTGAAGGGT 6535155 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||| |||| | |||||||| |||||| ||||||||||||||||||| |||||||| Sbjct 6535156 CAAAAAACAACATGACTATGAACACTTGGCCTCCACAAGCCAGTTATCCCTATGGTAACT 6535215 Query 222 TTTCTGGCACCT 233 |||||| ||||| Sbjct 6535216 TTTCTGACACCT 6535227 >seq78576 Length=21394870 Score = 199 bits (220), Expect = 7e-49 Identities = 166/201 (83%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||| ||| |||||||||||||||||||||| |||||| |||| | |||||| ||| Sbjct 19540108 TCAATAGCGTAAAACTAACCTGTCTCATGATGGTCTATCCCCA-----CATTCCCTGTTA 19540054 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 |||||||||||| |||| | || |||||||||||| ||||||| |||||| ||| Sbjct 19540053 GTGGGTGAACAA-CCAATGATTGGTGAATTCTGCTTCACAATGATAGAAAGAGCTGACTC 19539995 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| | Sbjct 19539994 TGAAGGATCAAAAAGCTACT--GCTATGAACGCTTGGCTGCCACAAGTCAGTTATCCTGG 19539937 Query 214 TGGTAACTTTTCTGGCACCTC 234 ||||||| |||||| |||||| Sbjct 19539936 TGGTAACATTTCTGACACCTC 19539916 >seq67905 Length=516 Score = 188 bits (208), Expect = 1e-45 Identities = 116/124 (94%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 308 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 249 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 248 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 189 Query 151 CATC 154 | || Sbjct 188 CGTC 185 >seq222 Length=1539498 Score = 185 bits (204), Expect = 1e-44 Identities = 119/130 (92%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 || |||||||| |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 864486 ATTCAACGCTTGGTGAATTCTGCTTCACAATGATAGCAAGAGCCGACATCGAAGGATCAA 864427 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 864426 AAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 864367 Query 225 CTGGCACCTC 234 ||| |||||| Sbjct 864366 CTGACACCTC 864357 >seq86 Length=4600712 Score = 170 bits (188), Expect = 3e-40 Identities = 123/142 (87%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 ||| | ||||||||| |||||| |||| |||||||||||||||||||||||||||||| Sbjct 2226410 AGGTTGAAACTAACCGGTCTCACACCGGTTTAAACCCAGCTCACGTTCCCTATTAGTGGG 2226351 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 |||||||||||| |||| |||||||||||| || ||||||||||| |||||||||| Sbjct 2226350 TGAACAATCCAATGCTTGGTGAATTCTGCTTCACAATAATAGGAAGAGCTGACATCGAAG 2226291 Query 159 GATCAAAAAGCAACGTCGCTAT 180 ||||||||||| |||| |||| Sbjct 2226290 GATCAAAAAGCGACGTTACTAT 2226269 >seq8 Length=51558079 Score = 170 bits (188), Expect = 3e-40 Identities = 133/159 (84%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 48 CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 107 ||||||||||| | ||| |||||||||||| ||| ||||||||||||| ||||||||||| Sbjct 10236171 CTAACCTGTCTAACGACAGTCTAAACCCAGTTCATGTTCCCTATTAGTAGGTGAACAATC 10236230 Query 108 CAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAA 167 ||| |||| |||||||||||| | |||| |||||| || | ||||||||||||| Sbjct 10236231 CAATGCTTGGTGAATTCTGCTTCACAACAATAGCAAGAGCAGATACTGAAGGATCAAAAA 10236290 Query 168 GCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 | |||||||||||| | || ||||||||||||||||| Sbjct 10236291 GTGGCGTCGCTATGAATGGTTAGCTGCCACAAGCCAGTT 10236329 Score = 120 bits (132), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 10/204 (5%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||| || | ||| ||||| ||||||| || || ||||||||| |||||| || || Sbjct 18076014 GTCAGCACTGGGGCAAAACAAACCTGTAACAGGATAGTCTAAACCTAGCTCATTTTTTCT 18076073 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATA---GGAAGAG 146 ||||| |||||||||| ||| || || | ||||||| |||||||| |||| || Sbjct 18076074 ATTAGCAGGTGAACAATACAATAGTTGCCAAGTTCTGCT---GTATGATAATAGGAACAG 18076130 Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 | |||| || ||||||||||||||| || |||| || |||| | ||| ||| | | | Sbjct 18076131 CAGACA--GAGGGATCAAAAAGCAACATCACTATAAATGCTTTGATGC--CAAACTACTA 18076186 Query 207 ATCCCTGTGGTAACTTTTCTGGCA 230 ||| |||| | ||||| ||| || Sbjct 18076187 ATCTTTGTGTTGACTTTGCTGACA 18076210 >seq47136 Length=697 Score = 165 bits (182), Expect = 1e-38 Identities = 116/131 (89%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 133 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 74 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 73 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 14 Query 120 AATTCTGCTTC 130 ||||||||||| Sbjct 13 AATTCTGCTTC 3 >seq461 Length=368643 Score = 149 bits (164), Expect = 1e-33 Identities = 134/163 (82%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 272880 ATGATAGGAAGAGCCGACATCGAAGGATCAAAA-GCAACGTTGCTATGAACGCTTGGCCA 272938 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC-GAGG 252 ||||||||||||||||||||||||||| |||||| |||||| || | ||| | | Sbjct 272939 CCACAAGCCAGTTATCCCTGTGGTAAC-TTTCTGACACCTCCTGCTTTAAAACCCAAAAA 272997 Query 253 GACTAAAGGATCGATAGGCCAC-ACTTTCATGGTTTGTATTCA 294 | | |||||||| ||||| | |||||| || |||| ||| Sbjct 272998 GTCAGAAGGATCGTGAGGCCCCTGCTTTCACAGTCTGTAGTCA 273040 >seq90 Length=4507728 Score = 143 bits (158), Expect = 5e-32 Identities = 153/203 (75%), Gaps = 23/203 (11%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||||| ||||||||| |||||| |||||||| |||||| |||||||| Sbjct 1785467 CATCAGTAGGGTCAAACTAACCGGTCTCAC-----TCTAAACCTAGCTCATGTTCCCTAG 1785413 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | | |||||||| ||||| ||||||| | |||| |||||| || Sbjct 1785412 TGG-GGGTGAACGATCCA--------------CTGCTTCACGACAATAGTAAGAGCTGAT 1785368 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | |||||||| |||| | ||| | ||||||||||||||| | |||||||| |||||| Sbjct 1785367 A---AAGGATCAGAAAGTGATGTCACAATGAACGCTTGGCTGTCGCAAGCCAGATATCCC 1785311 Query 212 TGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||||| ||| || Sbjct 1785310 TGTGGTAACTTTTCTGCCACTTC 1785288 >seq6 Length=62603786 Score = 111 bits (122), Expect = 3e-22 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||| |||| || |||| || |||| | || |||||||||||||||||||||| Sbjct 18476012 TCATCAGTGGGGTCAAGCTAATTTGGCTCACAAGAGTTTAAACCCAGCTCACGTTCCCTA 18475953 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| | | |||||| | || | | || |||||||| | | ||||||||| | || Sbjct 18475952 TTAGCGAGGGAACAAGCAAATGGATGGGGAGTTCTGCTTTGTAAGGATAGGAAGGACTGA 18475893 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 | | |||||||||| || || |||||||||| | |||| Sbjct 18475892 AACCAAAGGATCAAAGAGTGACATCGCTATGAATTCCTGGC 18475852 >seq9272 Length=660 Score = 84.2 bits (92), Expect = 4e-14 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| | ||||| || | | | |||| ||||||||||||||||||||||||| Sbjct 580 TACTAAGCAGGATTACTATCGCAACAATTAGTCAACAGTAGGGTAAAACTAACCTGTCTC 639 Query 60 ATGACGGTCTAAACCCAGCTC 80 | ||||||||||||||||||| Sbjct 640 ACGACGGTCTAAACCCAGCTC 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853728484320