Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq78564 86.0 4e-15 seq70704 86.0 4e-15 seq68451 86.0 4e-15 seq60394 86.0 4e-15 seq55715 86.0 4e-15 >seq78564 Length=8270741 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 5768310 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 5768367 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 5768368 TAAT-CAACGCGAGCT 5768382 >seq70704 Length=503 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 92 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 149 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 150 TAAT-CAACGCGAGCT 164 >seq68451 Length=516 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 413 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 470 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 471 TAAT-CAACGCGAGCT 485 >seq60394 Length=566 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 174 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 117 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 116 TAAT-CAACGCGAGCT 102 >seq55715 Length=623 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 475 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 532 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 533 TAAT-CAACGCGAGCT 547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300578362100