Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq12383 464 1e-128 seq12107 257 4e-66 >seq12383 Length=521 Score = 464 bits (514), Expect = 1e-128 Identities = 344/397 (87%), Gaps = 6/397 (2%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 431 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCG 372 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || |||||||| |||||||| ||||||| || |||||||| |||||| |||||| Sbjct 371 GATTTACTGGGTGTAAAGGGCGCGTAGGCGGGGATGCAAGTCAGATGTGAAAT-CTATGG 313 Query 133 -CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 || ||||| ||||| |||||||||| | || |||||| |||| || | |||| Sbjct 312 GCTTAACCCATAAACTGCATTTGAAACTGTATCTCTTGAGTGCTGGAGAGGTAGACGGAA 253 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 252 TTCCTTGTGTAGCGGTGAAATGCGTAGATATAAGGAAGAACACCAGTGGCGAAGGCGGCT 193 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 | |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 192 TTCTGGACTGAAACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 133 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371 |||||||||||||||||||||||||| | ||||||||||||| | | | || ||||| Sbjct 132 CTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTCGGGG---AGGAATCCT-CGGTG 77 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||||||| ||||||||||| | ||||||||||||||| Sbjct 76 CCGCAGCTAACGCAATAAGCACTCCACCTGGGGAGTA 40 >seq12107 Length=530 Score = 257 bits (284), Expect = 4e-66 Identities = 294/391 (75%), Gaps = 7/391 (2%) Strand=Plus/Minus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||| ||| Sbjct 428 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATTCGAGCGTTATCCGGATTTA 369 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||| ||||||||||||||| |||| ||||| ||||| |||| | || ||||||| Sbjct 368 TTGGGTTTAAAGGGTGCGTAGGCGGTTAAATAAGTTTGAGGTAAAAGACCATTGCTCAAC 309 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198 || || || || |||||| | |||| | | || ||| | ||||| | Sbjct 308 AGTGGCAC-GCCTTGAAAACTGTTTGACTAGGAAGTAAACGGCGCAGGCGGAATGAATCA 250 Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGA 258 |||||||||| |||| ||||||| | ||||||| | |||||||| |||||| | Sbjct 249 AGTAGCGGTGACATGCATAGATATGATTCAGAACACCGATCGCGAAGGCAGCTTGCGAGG 190 Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 | | |||| |||| || |||||||||||| | | ||||||||||||||||||||||| Sbjct 189 ATACGATTGACGCTGATGCACGAAAGCGTGGGTATCGAACAGGATTAGATACCCTGGTAG 130 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATA-AGTGCTCCGGTGCCGCAG 377 ||||||| ||||||||||| ||||| ||| || | ||| | || | ||| || || Sbjct 129 TCCACGCTGTAAACGATGATAACTAGATGTTGGCG---ATAGAATG--TCAGTGTCGGAG 75 Query 378 CAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || | ||||| ||||||||||||||| Sbjct 74 CGAAAGTGCTAAGTTATCCACCTGGGGAGTA 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202254344960