Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq620 347 4e-93 seq412 324 4e-86 seq78540 295 2e-77 seq810 286 1e-74 seq6 266 1e-68 seq78590 242 1e-61 seq78552 242 1e-61 seq431 221 4e-55 seq78576 192 2e-46 seq219 174 5e-41 seq49605 161 3e-37 seq16925 161 3e-37 seq6186 156 1e-35 seq1 149 2e-33 seq2 147 7e-33 seq244 138 4e-30 seq90 136 1e-29 seq78 134 5e-29 seq222 122 3e-25 seq72 122 3e-25 seq75395 120 1e-24 seq93 114 4e-23 seq78549 105 2e-20 seq78568 91.5 5e-16 seq3 86.0 2e-14 seq78591 82.4 2e-13 seq43 82.4 2e-13 >seq620 Length=152297 Score = 347 bits (384), Expect = 4e-93 Identities = 233/259 (90%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233 |||| ||| | || || ||||||| ||||| ||||||||||||||| ||| || | | Sbjct 10494 CCGCCTCACCGGGTACGTGAAAAAACTATAAGAGTAGTGGTATTTCACCGGCGGCCCAGA 10435 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 10434 GGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 10375 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 10374 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 10315 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 10314 TAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 10255 Query 414 ATGACGAGGCATTTGGCTA 432 ||||||||||||||||||| Sbjct 10254 ATGACGAGGCATTTGGCTA 10236 Score = 96.9 bits (106), Expect = 1e-17 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC 490 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 9411 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCAC 9354 >seq412 Length=431651 Score = 324 bits (358), Expect = 4e-86 Identities = 228/259 (88%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAA 233 |||| ||| | || || ||||||||||||| ||||||||||||||| ||| || | | Sbjct 142600 CCGCCTCACCGGGTACGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCCAGA 142541 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||||||||||||||||||||||| ||| |||||| | | ||||||||||||||| Sbjct 142540 GGCCTCCCACTTATTCTACACCTCTCACGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 142481 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||| | Sbjct 142480 CAACAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCCGTTCCAGTGGCTGTAGTTTCAC 142421 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 142420 TAGATAGTAGGTAGAGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAG 142361 Query 414 ATGACGAGGCATTTGGCTA 432 ||||||||||||||||||| Sbjct 142360 ATGACGAGGCATTTGGCTA 142342 Score = 165 bits (182), Expect = 3e-38 Identities = 97/101 (96%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 141561 CCTCAAGAGAGTCATAGTTACTCCCACCGTTTACCCGCGCTTCGTTGAATTTCTTCACTT 141502 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 141501 TGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 141461 >seq78540 Length=10169084 Score = 295 bits (326), Expect = 2e-77 Identities = 183/196 (93%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| |||||| | | ||||||||||||| |||| Sbjct 5678169 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGTTCAA 5678228 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 5678229 CAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 5678288 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 5678289 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCATCACTAATTAGATG 5678348 Query 417 ACGAGGCATTTGGCTA 432 |||||||||||||||| Sbjct 5678349 ACGAGGCATTTGGCTA 5678364 >seq810 Length=91012 Score = 286 bits (316), Expect = 1e-74 Identities = 181/196 (92%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||||||| ||| |||||| | | |||||||||||||||||| Sbjct 80457 CTCCCACTTATGCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAA 80398 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||| Sbjct 80397 CAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTTGCTAG 80338 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 80337 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTTATGCGCGTCACTAATTAGATG 80278 Query 417 ACGAGGCATTTGGCTA 432 | |||||||||||||| Sbjct 80277 ATGAGGCATTTGGCTA 80262 >seq6 Length=62603786 Score = 266 bits (294), Expect = 1e-68 Identities = 156/162 (96%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 20458385 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCGGTTCCCT 20458444 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||| Sbjct 20458445 TGGCTGTGGTTTCGCTAGATAGTAGGTGGGGACAGTGGGAATCTCATTCATCCATTCATG 20458504 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 |||||||||||||||||||||||||||||||||||||||||| Sbjct 20458505 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 20458546 >seq78590 Length=6954379 Score = 242 bits (268), Expect = 1e-61 Identities = 322/439 (73%), Gaps = 20/439 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||| | || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 6535321 CTTCTGCGCCACCGGAGGTTTCTGT-CTCCCTGAGCGCGCCTTAGGACACCTGCGTTACG 6535379 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT-CATCAACCCGGAT 125 |||| || | || | || |||| ||| |||||||||||||| ||| | | | | || Sbjct 6535380 GTTTGACTGTAGTACTGCTCCAGTCAATCTCCCCACCTGACACTGTTCCTGGAGCAGGTC 6535439 Query 126 CGGCCCGCGAAGGAC------CTTAACGCCAGAAA--ATGGTCGGTGAAGAC-CAGTTCC 176 ||| | | | || ||| | |||| | ||| | | | | | | ||| Sbjct 6535440 ATGCCTGGCATGTACTGGATGCTTGGAGTGAGAAGTGAGAGTCCCTCAGGGCTCGGCTCC 6535499 Query 177 --GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAA 233 || ||| | ||||| ||||||| ||||| |||| |||||||||| || ||| | Sbjct 6535500 TGGCCTCACCAAGTAAGTGAAAAAACAATAAGAGTAGAGGTATTTCACCAGCAGCCTGGA 6535559 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 | |||| | ||||||||||| ||| ||| |||||| | | |||| |||| | Sbjct 6535560 GGCCTCCAAATTATTCTACACA-CTCGTGTCTCTTCACAGTGCCAGACT-----CAAGTT 6535613 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||| ||| ||||||||||||||||||| ||||||||| ||| ||||| ||||||||| | Sbjct 6535614 CAAGAGGATCTTCTTTCCCCGCTGATTTGGCCAAGCCCATTCTCTTGGATGTGGTTTCAC 6535673 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||| | ||||||| |||||||||| ||| ||||||||| | |||||||||||| Sbjct 6535674 CCGATAGTGGGTAGGGACCGTGGGAATCTTGTTCATCCATTCACACATGTCACTAATTAG 6535733 Query 414 ATGACGAGGCATTTGGCTA 432 |||| |||||||||||||| Sbjct 6535734 ATGATGAGGCATTTGGCTA 6535752 >seq78552 Length=9794171 Score = 242 bits (268), Expect = 1e-61 Identities = 198/238 (83%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 196 aaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAACGGCTCCCACTTATTCTACAC 254 |||| ||| || |||||||||||||| || ||| | | | ||| |||||||| ||||| Sbjct 2396260 AAAATGATGAG--TAGTGGTATTTCACCAGCAGCCCAGAGGTCTCTCACTTATTTTACAC 2396203 Query 255 CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 314 |||||| || |||||| | | || |||| |||||||||||| | |||||||||| | Sbjct 2396202 CTCTCATATCTCTTCACAGTGCCAGATTAGAATCAAGCTCAACAAGCTCTTCTTTCCTGG 2396143 Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374 ||||||| |||||||| |||||||||||||||||||| ||||| ||||| | || | ||| Sbjct 2396142 CTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCACTAGACAGTAGGTGGGTAGAGT 2396083 Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||| ||||||||||| || || |||||||||||| |||||||||||||| Sbjct 2396082 GGGAATCTCGTTCATCCATTCATGTGCATCTCTAATTAGATGATGAGGCATTTGGCTA 2396025 >seq431 Length=435080 Score = 221 bits (244), Expect = 4e-55 Identities = 145/160 (91%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 193995 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCATTCCCT 194054 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||||||||||||| |||| ||| ||| |||||| || ||||||||||| Sbjct 194055 TGGCTGTGGTTTCGCTAGATAGTGTGTAGGAACATTGGCAATCTCATTCATCCATTCATG 194114 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAA 438 || ||||||| |||||||| |||||||||||||| |||| Sbjct 194115 CGTGTCACTAGTTAGATGATGAGGCATTTGGCTATTTTAA 194154 Score = 201 bits (222), Expect = 4e-49 Identities = 126/136 (93%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| || Sbjct 143078 AGGGTCTTCTTTCCCCGCTGATTCTGCCAGGCCCATTCCCTTGGCTGTGGTTTCGCTGGA 143137 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| |||||||||||||||||| ||| |||||||||||| | ||||||||||||||| Sbjct 143138 TAGTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGCACATCACTAATTAGATGA 143197 Query 418 CGAGGCATTTGGCTAC 433 ||||||||||| |||| Sbjct 143198 CGAGGCATTTGTCTAC 143213 Score = 120 bits (132), Expect = 1e-24 Identities = 211/303 (70%), Gaps = 32/303 (11%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| |||||| ||||||| |||| |||| ||| ||||| ||| Sbjct 142357 CTTCTGCTCCACAGGATGTTTCTGTCCTCCCTGAG-----CTTG-----CCTGCATTACT 142406 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| |||||||||||||||||| |||| |||||| Sbjct 142407 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC-----CCCGGAGA 142461 Query 127 GGCCCGCGA--AGGACCTTAACGCCAGAAAATGGTCGGTGAAG-ACCAGTTCCGCTT--- 180 || || | || || || || | ||| |||| | || |||| Sbjct 142462 GGGGCGTGGCCAGCAC-TTGCCGGGCGCT--TGGAGCCAGAAGCAAGAGCGGGGCTTGCC 142518 Query 181 -CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239 | | ||||||||||||||||||| ||||||||||| ||| | | | ||| Sbjct 142519 CCCCCGGGTAAGTAAAAAAACGATAAGAGTAGTGGTATTGCACCAGAGGC-------CTC 142571 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||||||||||||||| ||| |||||| | | | ||||||||||||||||||| Sbjct 142572 TCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGCCTAGAGTCAAGCTCAACAG 142631 Query 300 GGT 302 ||| Sbjct 142632 GGT 142634 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||||| |||| | Sbjct 193805 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCACCTTAGGACACCTGTGTTACG 193864 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||| ||| ||||| |||||||||||| |||| Sbjct 193865 GTTTGACAGGTGTACCGCCTCAGTCAAACCCCCCACCTGACACTGTC 193911 >seq78576 Length=21394870 Score = 192 bits (212), Expect = 2e-46 Identities = 191/245 (78%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 189 AAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAACGGCTCCCACTTAT 247 |||| ||||||| ||| | |||||| |||||| || || ||| | | ||| ||||| Sbjct 19539568 AAGTGAAAAAACAATATGAGTAGTGATATTTCTCTGGCAGCCTGGAGGCCTCTAACTTAG 19539509 Query 248 TCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCT 307 |||||| |||||| ||| |||||| | |||||| ||| ||||||| |||||||| Sbjct 19539508 TCTACATCTCTCATGTCTCTTCACATTACCAGACTAG--TCACACTCAACAAGGTCTTCT 19539451 Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 ||| | || | | ||||||||| || | |||||||||||||| ||||||||||| | | Sbjct 19539450 TTCACTGCGTAGTATGCCAAGCCCATTTCATTGGCTGTGGTTTCACTAGATAGTAGGTGG 19539391 Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 |||||||||| |||| || | |||||||||| | |||||||||||| || |||| |||| Sbjct 19539390 AGACAGTGGGACTCTCATTCAGCCATTCATGCACATCACTAATTAGAGGATGAGGTATTT 19539331 Query 428 GGCTA 432 | ||| Sbjct 19539330 GTCTA 19539326 Score = 125 bits (138), Expect = 2e-26 Identities = 92/107 (86%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 305296 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 305237 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| |||||||||||||||||| |||| Sbjct 305236 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC 305190 >seq219 Length=1802611 Score = 174 bits (192), Expect = 5e-41 Identities = 117/131 (89%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||| |||||||| ||||||||| |||||||||||||||||||||||||| ||| | Sbjct 507410 CTTTCCCTGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTAGATTGTACGT 507351 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 ||| |||||||||||||| || | |||||||||||| ||||||||||||| | ||||||| Sbjct 507350 AGGAACAGTGGGAATCTCATTCACCCATTCATGCGCATCACTAATTAGATAATGAGGCAT 507291 Query 426 TTGGCTACCTT 436 |||||||| || Sbjct 507290 TTGGCTACATT 507280 Score = 123 bits (136), Expect = 8e-26 Identities = 117/146 (80%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCG-ATAAGGGTAGTGGTATTTCACTTGC-GCCGAAACGGCTCCCACTT 245 ||||| ||||||| |||| ||||||||||||| | || ||| | | ||||||||| Sbjct 507423 TAAGTGAAAAAACTTATAACGGTAGTGGTATTTTATCGGCAGCCTGGATGCCTCCCACTT 507482 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||| | || ||| ||| |||| ||| |||||| ||||||||||||||||||| Sbjct 507483 ATTCTATATCTATCATGTCTCTTCAGT--GTCCCACTAGAATCAAGCTCAACAGGGTCTT 507540 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCC 331 |||||||| ||||||| ||||||||| Sbjct 507541 CTTTCCCCACTGATTCTGCCAAGCCC 507566 >seq49605 Length=678 Score = 161 bits (178), Expect = 3e-37 Identities = 94/97 (97%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGAC 60 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||| ||||||||| Sbjct 61 ATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 97 >seq16925 Length=1547 Score = 161 bits (178), Expect = 3e-37 Identities = 94/97 (97%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 338 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGAC 279 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||| ||||||||| Sbjct 278 ATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 242 >seq6186 Length=1201 Score = 156 bits (172), Expect = 1e-35 Identities = 199/270 (74%), Gaps = 13/270 (5%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 860 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 801 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT- 125 |||| |||| ||| ||||||||| |||||||||||||||||| |||| | ||| | Sbjct 800 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTCCCCGGAGCGGGTC 741 Query 126 -----CGGCCCGCGAAGGAC-CTTAACGCCAGAA--AATGGTCGGTGAAGACCAGTTC-- 175 |||| |||| || | ||| ||||||| | | | | | | | | Sbjct 740 GCACCCGGCACGCGCCGGGCGCTTGGAGCCAGAAGCGAGAGCCCCTCGGGGCTCGCCCCC 681 Query 176 -CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAA 233 ||| ||| | ||||| ||||||||||||| ||||||||||||||| || ||| | Sbjct 680 GCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCCGGA 621 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGT 263 | |||||||||||||||||||||||| || Sbjct 620 GGCCTCCCACTTATTCTACACCTCTCATGT 591 >seq1 Length=77392008 Score = 149 bits (164), Expect = 2e-33 Identities = 113/132 (86%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 209 TAGTGGTATTTCACTTGC-GCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267 ||||||||||||||| || ||| | | |||||||||||||||||||||||| ||| | Sbjct 20344928 TAGTGGTATTTCACTGGCAGCCCAGAGCCCTCCCACTTATTCTACACCTCTCATGTCTCT 20344987 Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 ||||| | | ||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct 20344988 TCACAGTGCCAAACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCCGTTGATTCTGCCAA 20345047 Query 328 GCCCGTTCCCTT 339 ||||| |||||| Sbjct 20345048 GCCCGCTCCCTT 20345059 >seq2 Length=68452538 Score = 147 bits (162), Expect = 7e-33 Identities = 231/327 (71%), Gaps = 28/327 (9%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| |||||||||||| |||| | |||||||||||||| |||| | Sbjct 11248090 CTTCTGCTCCATGGGAGGTTTCTGTTCTCCCTGAGCTCACCTTAGGACACCTGTGTTACG 11248031 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||| ||||| |||||||| ||||||||| |||| || || || Sbjct 11248030 GTTTGACAGGTGTACCGTCCCAGTCAAACTCCACACCTGACACTGTCCCCAGAGTGGGTC 11247971 Query 127 --GGCCCGC--GAA---GGACCTTAACGCCAGAA---AATGGTCGGTGAAGACCA--GTT 174 | || || | | || || ||||||| | | | || | || Sbjct 11247970 ATGCCCAGCATGCACTGGGTATTTGGAGCCAGAAGTGAGAGCCCCTTGGGGCTCACCCCC 11247911 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234 |||| ||| ||||| ||||||||||||| ||||||||||||| ||| | Sbjct 11247910 CCGCCTCACCAGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTC-------CCG-GAG 11247859 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 | |||||||||||||||||||||||| ||| |||| | | ||||||| | Sbjct 11247858 GCCTCCCACTTATTCTACACCTCTCATGTCTCTTCATGGTGCCAGACTAGA--------C 11247807 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTC 321 ||||||||||||||||||| ||||||| Sbjct 11247806 AACAGGGTCTTCTTTCCCCTCTGATTC 11247780 >seq244 Length=1272590 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||| |||||| |||||||| ||| || ||| || ||| |||||||||||||||||| Sbjct 356259 TTAAGACAGTCATTGTTACTCCTGCCATTCACCTGCACTTCATTGAATTTCTTCACTTTG 356318 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 356319 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 356357 >seq90 Length=4507728 Score = 136 bits (150), Expect = 1e-29 Identities = 141/184 (77%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 || |||| |||| ||| ||||| | | ||||||| || ||||||| | || | ||| Sbjct 1785056 CTCCACCCCTCATGTCTCTTCACTGTGCCACACTAGAGCCATGCTCAACTGAGTTTCCTT 1784997 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||| ||||||| |||||||| ||||||||||||||||||| || | | || || | || Sbjct 1784996 TCCCCACTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTTGCCACACAGAAGCTGGG 1784937 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 || |||||| |||| || ||||| ||| | | | |||||||||| ||| |||||| Sbjct 1784936 GAGCGTGGGAGTCTCATTCATCCAGTCACACACATTGCTAATTAGAT---GAGCCATTTG 1784880 Query 429 GCTA 432 |||| Sbjct 1784879 GCTA 1784876 Score = 96.9 bits (106), Expect = 1e-17 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | ||| ||||||||||||||| |||| |||| |||| ||| |||||| |||||| Sbjct 1785241 CTTCTCCTCCACAGGAGATTTCTGTCCTCCCTGAGCTTCCCTCAGGGCACCTGTGTTATG 1785182 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| | ||||| || |||||||||||| |||||| Sbjct 1785181 GTTTGACAGGTGTACTGCCCCCATCAGACTCCCCACCTG--AATGTC 1785137 >seq78 Length=5101393 Score = 134 bits (148), Expect = 5e-29 Identities = 118/146 (81%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 || ||||||| |||||| ||| |||| | ||||||||| || ||||||||||| Sbjct 1538637 CATTTATTCTGCACCTCATGTGTCTCTTCAGT--GCCGGACTAGACTCGAGCTCAACAGG 1538694 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360 ||| |||||| || || |||| ||||||||| |||||||||||||||||| | ||||||| Sbjct 1538695 GTCGTCTTTCGCCACTAATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTTGTTAGATAG 1538754 Query 361 TAGATAGGGACAGTGGGAATCTCGTT 386 | |||||||| |||||||||| || Sbjct 1538755 CTGGTAGGGACAATGGGAATCTCATT 1538780 >seq222 Length=1539498 Score = 122 bits (134), Expect = 3e-25 Identities = 91/107 (85%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||| |||||| | Sbjct 864197 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCCGCGTTACG 864256 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| |||||||||||||||||| |||| Sbjct 864257 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC 864303 >seq72 Length=5454768 Score = 122 bits (134), Expect = 3e-25 Identities = 91/107 (85%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 2743103 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 2743162 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| |||||||| |||||||||||||||||| |||| Sbjct 2743163 GTTTGACAGGTGTATCGCCCCAGTCAAACTCCCCACCTGACACTGTC 2743209 >seq75395 Length=510 Score = 120 bits (132), Expect = 1e-24 Identities = 92/108 (85%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 285 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 344 Query 67 GTTTAACAGATGT-GCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| |||||||||||||||||| |||| Sbjct 345 GTTTGACAGGTGTAACCGCCCCAGTCAAACTCCCCACCTGACACTGTC 392 >seq93 Length=4379228 Score = 114 bits (126), Expect = 4e-23 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct 3994114 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCACTTCATTGAATTTCTTCACTTT 3994173 Query 494 GACATTCAGAGCA 506 ||||||||||||| Sbjct 3994174 GACATTCAGAGCA 3994186 >seq78549 Length=11360908 Score = 105 bits (116), Expect = 2e-20 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 28 CTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCC 87 |||| |||| |||| | ||||||||||||||||||| ||||| |||| ||| ||||||| Sbjct 7097431 CTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACGGTTTGACAGGTGTACCGCCCC 7097490 Query 88 AGCCAAACTCCCCACCTGACAATGTC 113 || |||||||||||||||||| |||| Sbjct 7097491 AGTCAAACTCCCCACCTGACACTGTC 7097516 >seq78568 Length=17655681 Score = 91.5 bits (100), Expect = 5e-16 Identities = 76/92 (83%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||| ||||||||||||| ||| ||||||| || ||||||||||||||||||| | Sbjct 1780205 GAGAATCATAGTTACTCCTGCCATTTACCCATAGTTCAGTGAATTTCTTCACTTTGACCT 1780146 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 || ||||||||||||||| |||||| |||| Sbjct 1780145 CCAAAGCACTGGGCAGAAA--ACATTGTGTCA 1780116 >seq3 Length=75876001 Score = 86.0 bits (94), Expect = 2e-14 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||| ||| |||| |||| ||||||| | || ||| ||||||||||| Sbjct 60737254 ACCTTAAGAACATCAATGTTATTCCCAGAGTTTACCTGAAATTCATTGTATTTCTTCACT 60737313 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||||||||||||||||| ||| | | || ||||| Sbjct 60737314 TTGACATTCAGAGCACTGGGCAGTAATTAAACTGTGTCAA 60737353 >seq78591 Length=8675703 Score = 82.4 bits (90), Expect = 2e-13 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5702599 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 5702555 >seq43 Length=7243934 Score = 82.4 bits (90), Expect = 2e-13 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||||||||||||||||||| ||||| |||| ||| | |||| || ||||||||||| ||| Sbjct 623447 CCTTAGGACACCTGCGTTACGGTTTGACAGGTGTACTGCCCAAGTCAAACTCCCCAGCTG 623388 Query 106 ACAATGTC 113 ||| |||| Sbjct 623387 ACACTGTC 623380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633914814560