Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysemys_20picta_20bellii_20[refseq_20GCF_5F000241765.3_202014-03- 31] 78,595 sequences; 2,365,766,571 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq135 98.7 8e-16 seq140 86.0 5e-12 seq78549 82.4 6e-11 >seq135 Length=2957239 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| ||||| |||||| | | ||||| ||||||||||| || || |||| Sbjct 2803090 TGGAGCGATTCAGCCAGGAAGTGCAAATCCCAGAGGCTCGTTGTTTCTATGGATTTCAGA 2803149 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || || |||||||| |||||||||||||||||| | || || || || ||||||| Sbjct 2803150 TTCTAATTGAGAATGTTCACTCGGAGATGTACAGTTTGCTAATAGACACTTACATCA 2803206 >seq140 Length=3053534 Score = 86.0 bits (94), Expect = 5e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 ||||| || ||| || ||||| || ||||||||||| ||||||| || | ||||| Sbjct 17331 TCTACCCGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAAGAAGAGGTCCCTGGCTCGC 17390 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 |||||||| | ||| || || || ||| || |||||||| ||||| ||||| Sbjct 17391 TGCTCCTCCTTCCCGGTGTTCTTCTTCAGGTCAAGAAACTCAAAAATGTCCAAGTGCCAA 17450 Query 66449 GGTTCCAGGTAGATGGCGAA 66468 || || ||||||||||| || Sbjct 17451 GGCTCAAGGTAGATGGCAAA 17470 >seq78549 Length=11360908 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || || || || | || || || |||||||| |||||||||| Sbjct 7631819 TGGAGCGATTCAGCCAAGAAGTACAGGTAACAGAAGCACGCTGTTTCTATGGCTTCCAGA 7631760 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||| ||||| || | || || || ||||||||| | ||||| ||||| ||||| Sbjct 7631759 TTGCTATGGAAAACATACATTCAGAAATGTACAGTCTGCTCATAGATACTTACAT 7631705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397187178930800