Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13] 70 sequences; 2,049,536,252 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq41 174 3e-41 seq1 170 4e-40 seq33 168 1e-39 seq29 165 1e-38 seq27 163 5e-38 seq66 149 1e-33 seq64 145 1e-32 seq35 143 5e-32 seq62 111 3e-22 seq21 80.6 5e-13 seq65 77.0 6e-12 seq24 73.4 7e-11 >seq41 Length=19343079 Score = 174 bits (192), Expect = 3e-41 Identities = 208/276 (75%), Gaps = 5/276 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| | |||| || | ||||||||||||||||||||||||| Sbjct 4164868 ATGCTCTTAACTGAGTGTCCTGGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTT 4164927 Query 99 CAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||||||||| | || |||||| | ||| |||||||| ||||||||| | | |||| Sbjct 4164928 CAAAGCAGGCTGGTCGCCGGAATACTTCAGCTAGGAATAATGGAATAGGAC-TCCTGTTC 4164986 Query 158 TATTTTGTTGGTTTCTAGGACCGC-CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 |||||||||||||| | ||| | | | |||||||| ||||| | ||||| | || Sbjct 4164987 TATTTTGTTGGTTT-TCGGAACTCGGGCCATGATTAAGAGGGACGGCCGGGGACATTCGT 4165045 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| || | |||||||| || Sbjct 4165046 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAAAGCGAAAGCATT 4165105 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 4165106 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 4165140 >seq1 Length=270692262 Score = 170 bits (188), Expect = 4e-40 Identities = 205/275 (75%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| | |||| || | ||||||||||||||||||||||||| Sbjct 197683162 ATGCTCTTAACTGAGTGTCCTGGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTT 197683103 Query 99 CAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||||||||| | || |||||| ||| |||||||| ||||||||| | |||||| Sbjct 197683102 CAAAGCAGGCTGGTCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTTC 197683044 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| | || | | |||||||| ||||| | |||||| | ||| Sbjct 197683043 TATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTA 197682984 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || | |||||||||||||||||| ||||| || | |||||||| || Sbjct 197682983 TTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAAAGCGAAAGCATTT 197682924 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| |||| ||||| Sbjct 197682923 GCCAAGATTGTTTTCATTAATCA-AGAACAAAAGT 197682890 >seq33 Length=109106476 Score = 168 bits (186), Expect = 1e-39 Identities = 211/284 (74%), Gaps = 9/284 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| | |||| || ||||||||||||||||||||||||||| Sbjct 49722182 ATGCTCTTAACTGAGTGTCCTGGGGGTCCGAAGCTTTTACTTTGAAAAAATTAGAGTGTT 49722123 Query 99 CAAAGCAGGC-CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 || ||||||| | || |||||| || |||||||| ||||||||| | |||||| Sbjct 49722122 CAGAGCAGGCTGGTCGCCGGAATACTCCAGTTAGGAATAATGGAATAGGAC-TCCGGTTC 49722064 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG---TGTCA 214 |||||||||||||| || || | | |||||||| |||||| | | |||| | ||| Sbjct 49722063 TATTTTGTTGGTTTTCAGAACTGGGGCCATGATTAAGAGGGATGGCCAGGGGCATTCTCA 49722004 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 | | | | |||||||||||||||||| ||||| || | |||||||| Sbjct 49722003 TTGTGC---CGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAAAGCGAAAGCA 49721947 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||| |||||||||||||||| ||| |||||| || || Sbjct 49721946 TTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGTCAGAGG 49721904 >seq29 Length=37982970 Score = 165 bits (182), Expect = 1e-38 Identities = 210/284 (74%), Gaps = 9/284 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| | | | ||| | |||||| |||||||||||||| ||| Sbjct 31774057 ATGCTCTTAACTGAGTGTCCTGCAGGTCCAAAGCGTTTACTCTGAAAAAATTAGAGCGTT 31773998 Query 99 CAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||||||||| | || |||||| ||| |||||||| ||||||||| | |||||| Sbjct 31773997 CAAAGCAGGCTGGTCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTTC 31773939 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| | || | | |||||||| ||||| || ||||| | ||| Sbjct 31773938 TATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGACAGCTGGGGGCATTCGTA 31773879 Query 218 TTCAATTGTCA---GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 || || || ||||||||||||||||| ||| || ||| | ||||||||| Sbjct 31773878 TTG---TGCCACTAGAGGTGAAATTCTTGGACCAGCGGAAAACAAACCAAAGCGAAAGCG 31773822 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||| |||||||| ||||||| ||| |||||| || || Sbjct 31773821 TTTGCCAAGAATGTTTTCGTTAATCA-AGAATGAAAGTCAGAGG 31773779 Score = 145 bits (160), Expect = 1e-32 Identities = 203/281 (72%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| | |||| ||| |||||||| ||||||| ||||| || Sbjct 16055743 ATGCTCTTAACTGAGTGTCCTGGGGGTCCAAAGAGTTTACTTTCAAAAAATGAGAGTATT 16055684 Query 99 CAAAGCAGGCCTTTGCTCGAA-TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||||||||| | |||| ||| ||| ||||||| ||||||||| | ||||| Sbjct 16055683 CAAAGCAGGCTGGTCACCGAAATACTCCAGCTAGGAATAACGGAATAGGAC-TCCGGTTA 16055625 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||| ||||||||| ||| || | | |||||||| ||||| | ||||| | ||| Sbjct 16055624 TATTCTGTTGGTTTTTAGAACTGGGGCCATGATTAAGAGGGACGGCTGGGGGCATTCGTA 16055565 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || | |||||||||||||||||| ||||| ||| | | |||||| || Sbjct 16055564 TTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACCAAAGTGAAAGCATTT 16055505 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||| |||||||||||||| | ||| |||||| || || Sbjct 16055504 GCCAAGAATGTTTTCATTAATTA-AGAATGAAAGTCAGAGG 16055465 >seq27 Length=40567063 Score = 163 bits (180), Expect = 5e-38 Identities = 200/268 (75%), Gaps = 10/268 (4%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAG--TG 96 |||| ||| |||| |||| | |||| || | ||||||||||||||||||||| || Sbjct 12945196 ATGCTCTTAACTGAGTGTCCTGGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGAGTG 12945255 Query 97 TTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||||| | ||| |||||| |||| |||||||| ||||||||| | |||| Sbjct 12945256 TTCAAAGCAGGTTGGTCGCTGGAATACTCCAGCAAGGAATAATGGAATAGGAC-TCCGGT 12945314 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | || | | |||||||| |||||| | || ||| | | Sbjct 12945315 TCTATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGATGGCCGCGGGCATTCG 12945374 Query 216 TATTCAATTGTCA---GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 |||| || || ||||||||||||||||| | ||| ||| | ||||||| Sbjct 12945375 TATTG---TGCCACTAGAGGTGAAATTCTTGGACCGGCGCAGGACAAACCAAAGCGAAAG 12945431 Query 273 CGTTCACCAAGGATGTTTTCATTAATCA 300 | || ||||| |||||||||||||||| Sbjct 12945432 CATTTGCCAAGAATGTTTTCATTAATCA 12945459 >seq66 Length=60305753 Score = 149 bits (164), Expect = 1e-33 Identities = 205/279 (73%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| || |||| |||| | |||| | | | | | ||||||||||||||||||| |||| Sbjct 29159666 ATGCTATTAACTGAGTGTCCTGGGG-GTCTGAAGCGTTTACTTTGAAAAAATTAG-GTGT 29159609 Query 98 TCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||||| |||| |||||| ||| |||||||| ||||||||| | ||||| Sbjct 29159608 TCAAAGCAGGCTGATTGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 29159550 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | || | | |||||||| |||| | ||||| | | Sbjct 29159549 CTATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGGCGGCTGGGGGCATTCAT 29159490 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 || | |||||||||||||||||| ||||| || | |||||||| || Sbjct 29159489 GTTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAAAGCGAAAGCATT 29159430 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 ||||| |||||||||||||||| ||| |||||| || Sbjct 29159429 TGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGTCAG 29159392 >seq64 Length=84437661 Score = 145 bits (160), Expect = 1e-32 Identities = 204/280 (73%), Gaps = 10/280 (4%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| | |||| || | ||||||||||||||||||||||||| Sbjct 77118771 ATGCTCTTAACTGAGTGTCCTGGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTT 77118712 Query 99 CAAAGCAGGC-CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||||||||| | || |||||| ||| |||||||| ||||||| | | |||||| Sbjct 77118711 CAAAGCAGGCTGGTCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGGC-TCCGGTTC 77118653 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG-- 215 | |||||||||| | || || | |||||||| | |||| | | |||| | | Sbjct 77118652 TGTTTTGTTGGTATTCAGAACTAGGGCCATGATTAAGATGGATGGCCAGGGGCATTCGTT 77118593 Query 216 -TATTCAATTGTCAGAGGTGAAATTCTT-GGATTTATTGAAGACTAACTACTGCGAAAGC 273 ||| | | | ||||||||| || || || | | ||||| ||| | | |||||| Sbjct 77118592 TTATGCCACT---AGAGGTGAACTTGTTAAGACTGCCTCAAGACGAACAAAAGTGAAAGC 77118536 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 || ||||| |||||||||||||||| ||||||||||| Sbjct 77118535 ATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTT 77118497 Score = 104 bits (114), Expect = 4e-20 Identities = 122/161 (76%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 87 AATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAG 145 |||||||||||||||||||||| | || |||||| ||| |||||||| |||||| Sbjct 20840480 AATTAGAGTGTTCAAAGCAGGCTGGTCGCCGGAATACTCCAGCTAGGAATAATGGAATAG 20840421 Query 146 GACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCG 205 ||| | |||||||||||||||||||| | || | | |||||||| ||||| | || Sbjct 20840420 GAC-TCCGGTTCTATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGACGGCCG 20840362 Query 206 GGGGTGTCAGTATTCAATTGTCAGAGGTGA-AATTCTTGGA 245 |||| | ||||| | |||||||| |||||||||| Sbjct 20840361 GGGGCATTCGTATTGTGCCGCTAGAGGTGAGAATTCTTGGA 20840321 >seq35 Length=18284174 Score = 143 bits (158), Expect = 5e-32 Identities = 201/276 (73%), Gaps = 11/276 (4%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| | |||| | | | | | ||||| ||||||||||||| Sbjct 17738007 ATGCTCTTAACTGAGTGTCCTGGGG-GTCTGAAGCATTTAC------AAAATTAGAGTGT 17738059 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||| ||||| | ||| |||||| | | |||||||| ||||||||| | | ||| Sbjct 17738060 TCAAAACAGGCTGATCGCTGGAATACTCCAACTAGGAATAATGGAATAGGAC-TCCAGTT 17738118 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||| ||||||||| || || | | |||||||| |||||| | ||||| | || Sbjct 17738119 CTATTGTGTTGGTTTTCAGAACTGGGGCCATGATTAAGAGGGATGGCTGGGGGCATTCGT 17738178 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| | ||||| || | |||||||| || Sbjct 17738179 ATTGTGCCGCTAGAGGTGAAATTCTTGGACTGGCGCAAGACGGACCAAAGCGAAAGCATT 17738238 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| ||| |||||| Sbjct 17738239 TGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGT 17738273 >seq62 Length=117929553 Score = 111 bits (122), Expect = 3e-22 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAATACATTAGCATGGAA 134 ||| ||||||||||||| ||||||||||||||| | || |||||| ||| |||| Sbjct 97424447 TACATTGAAAAAATTAGTGTGTTCAAAGCAGGCTGGTCACTAGAATACTCCAGCTAGGAA 97424506 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||||| || | || |||||| |||| | || ||||| || | |||| ||| Sbjct 97424507 CAATGGAATAGCAC-TCTGGGTCTATTGTGTTTGGTT-TAGGAACGGGGCCATGAATAAG 97424564 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 |||||| | | |||| | ||||| || ||||||||||||||||||| || Sbjct 97424565 AGGGATGGCCAGGGGCATTCGTATTGTGCCGTTAGAGGTGAAATTCTTGGATGGGGGCAA 97424624 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT-TAATCA 300 ||| || | || |||| ||| ||||| ||||||| | |||||| Sbjct 97424625 GACAAATGAAAGCAAAAGAGTTTGCCAAGAATGTTTTTTTATAATCA 97424671 >seq21 Length=203625132 Score = 80.6 bits (88), Expect = 5e-13 Identities = 111/154 (72%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||| | || | | |||||||| ||||| | ||||| | |||| Sbjct 64975423 ATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGACGGCTGGGGGCATTCGTAT 64975364 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | | |||||||||||||||||| ||||| || | |||||||| || Sbjct 64975363 TGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAAAGCGAAAGCATTTG 64975304 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 64975303 CCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 64975271 >seq65 Length=73173314 Score = 77.0 bits (84), Expect = 6e-12 Identities = 80/103 (78%), Gaps = 8/103 (8%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC----GAATACATTAGC 128 |||||||||||| ||||||||||||||||||||||| || || |||||| ||| Sbjct 28164133 TTTTACTTTGAAGAAATTAGAGTGTTCAAAGCAGGC---TGGTCACCAGAATACTCCAGC 28164077 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171 ||||||| |||||||| | ||||| | || |||||||| Sbjct 28164076 TAGGAATAACAGAATAGGTC-CCTGGTTCCACTTAGTTGGTTT 28164035 >seq24 Length=75875076 Score = 73.4 bits (80), Expect = 7e-11 Identities = 113/159 (71%), Gaps = 7/159 (4%) Strand=Plus/Minus Query 160 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219 |||||||||| | || | | | |||||||| |||| | | ||||| | ||||| Sbjct 57220638 TTTTGTTGGTATTCAGAAGTGGGGCCATGATTAAGAGGGGTGGCCGGGGCCATTCGTATT 57220579 Query 220 CAATTGTCA---GAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 || || ||||||||||||||||||| ||||| ||| | | |||||| || Sbjct 57220578 G---TGCCACTAGAGGTGAAATTCTTGGATTGGCACAAGACAAACCAAAGTGAAAGCATT 57220522 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 ||||| |||||||||| ||||| ||| |||||| || Sbjct 57220521 TGCCAAGAATGTTTTCATCAATCA-AGAAGGAAAGTCAG 57220484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199359360