Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crocodylus_20porosus_20[refseq_20GCF_5F001723895.1_202016-09-13]
70 sequences; 2,049,536,252 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq25 383 5e-104
seq63 320 5e-85
seq24 316 7e-84
seq33 264 4e-68
seq22 260 5e-67
seq27 181 3e-43
seq1 158 4e-36
seq66 147 7e-33
seq40 136 1e-29
seq21 120 1e-24
seq30 96.9 1e-17
seq62 95.1 4e-17
seq14 95.1 4e-17
seq39 86.0 2e-14
>seq25
Length=45393205
Score = 383 bits (424), Expect = 5e-104
Identities = 353/442 (80%), Gaps = 16/442 (4%)
Strand=Plus/Minus
Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||| ||||| || |||| ||||||| |||| |||| ||||||||||||||| |||
Sbjct 41955436 TCTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCATTAC 41955377
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125
||||| |||| ||| ||||||||| ||||||||||||||||| |||| || ||| |
Sbjct 41955376 GGTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACGCTGTCCCCAGAGCGGGT 41955317
Query 126 CG------GCCCGCGA-AGGACCTTAACGCCAGAA---AATGGTC----GGTGAAGACCA 171
| || || | ||| ||| ||||||| || | | ||| | ||
Sbjct 41955316 CACGCCAAGCACGTGCCAGGCGCTTGGAGCCAGAAGCGAAAGCCCCTCAGGTCTCGCCCT 41955257
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA 231
|||| ||| | ||||| |||||| |||||| |||||||||||||||| ||| |
Sbjct 41955256 CC-CCGCCTCACCGGGTAAGTGAAAAAATGATAAGTGTAGTGGTATTTCACTGGCGGCCC 41955198
Query 232 AACGGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290
||| ||||||||||||||||||||||| ||| |||||| | | ||||||||| ||
Sbjct 41955197 GGGGGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTAAA 41955138
Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 41955137 GCTCAACAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTT 41955078
Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410
||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct 41955077 CGCTAGATAGTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGCGCATCACTAAT 41955018
Query 411 TAGATGACGAGGCATTTGGCTA 432
||||||| ||||||||||||||
Sbjct 41955017 TAGATGATGAGGCATTTGGCTA 41954996
Score = 170 bits (188), Expect = 6e-40
Identities = 102/107 (95%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
|| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 41953743 TGCCTCCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCT 41953684
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 41953683 TCACTCTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 41953637
>seq63
Length=80678228
Score = 320 bits (354), Expect = 5e-85
Identities = 218/243 (90%), Gaps = 3/243 (1%)
Strand=Plus/Minus
Query 193 aaaaaaaC--GATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC-TCCCACTTATTC 249
|||||||| |||||| ||||||||||||||| ||| | ||| ||||||||||||
Sbjct 23829981 AAAAAAACCCGATAAGAGTAGTGGTATTTCACCGGCGGCCCGGGGGCCTCCCACTTATTC 23829922
Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309
||||||||||| ||| |||||| | | |||||||||||||||||||||||||||||||
Sbjct 23829921 TACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 23829862
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct 23829861 CCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCTCTAGATAGTAGGTGGGG 23829802
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 23829801 ACAGTAGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 23829742
Query 430 CTA 432
|||
Sbjct 23829741 CTA 23829739
Score = 217 bits (240), Expect = 5e-54
Identities = 165/193 (85%), Gaps = 5/193 (3%)
Strand=Plus/Minus
Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
||| ||||||||||||||||||||||| ||| |||||| | | ||||||||||| ||
Sbjct 21483750 ACGCCTCCCACTTATTCTACACCTCTCGTGTCTCTTCACAGTGCCAGACTAGAGTCATGC 21483691
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||||||| ||| ||| ||| | ||||||||||||||||||| |
Sbjct 21483690 TCAACAGGGTCTTCTTTCCCCACTG-TTCTGCC----CTGTTCCCTTGGCTGTGGTTTTG 21483636
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|||||||||| || |||||||||||||||| || ||||||||||| | |||| ||||||
Sbjct 21483635 CTAGATAGTAAGTAAGGACAGTGGGAATCTCATTCATCCATTCATGTGTGTCATTAATTA 21483576
Query 413 GATGACGAGGCAT 425
||||| |||||||
Sbjct 21483575 GATGATGAGGCAT 21483563
Score = 86.0 bits (94), Expect = 2e-14
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||| ||||||||||||||||| || || ||| ||| |||||||||||| ||
Sbjct 40577384 CTTAAAAGAGTCATAGTTACTCCTACCACATATTCGCACTTCAATGAATTTCTTCATGTT 40577443
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||| | | ||||| | ||||||||||||| |||||||
Sbjct 40577444 GACATAGAAAACACTGAGTAGAAATCACATTGTGTCAACA 40577483
>seq24
Length=75875076
Score = 316 bits (350), Expect = 7e-84
Identities = 335/439 (76%), Gaps = 18/439 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| |||| || ||||||| || | |||| |||||||||||||||||||||
Sbjct 40362260 CTTCTGCTCCACAGAAGGTTTCTGTCCTGCCTGAGCTTGCCTTAGGACACCTGCGTTATG 40362201
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| | | || ||| || |||||||||||||||| |||| || | | ||
Sbjct 40362200 GTTTGACAGGTATACCACCCTAGTCAAACTCCCCACCTGATGCTGTCCCCAGAGCAGGTC 40362141
Query 127 GGCCCGCGAA-------GGACCTTAACGCCAGAAAATGG-----TCGGTGAAGACCAGTT 174
| || | | || ||| ||||||| | |||| | ||
Sbjct 40362140 GCACCCAGCATTCACCGGGTGCTTGGAGCCAGAAGCGAGACCCCTCGGGGCTCCCCC--- 40362084
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234
|| | ||| || |||||||||||| ||| || |||||||||||||| ||| |
Sbjct 40362083 CCACCTCACTGGGTAAGTAAAAAAATGATGAG--TAGTGGTATTTCACCGGCGGCCCGGG 40362026
Query 235 GGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
||| |||||||| ||||||| || ||| ||| |||||| | | ||||| |||||||||
Sbjct 40362025 GGCCTCCCACTTTTTCTACAACTTTCATGTCTCTTCACAGTGCCAGACTACAGTCAAGCT 40361966
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||||||| |||||||| ||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct 40361965 CAACAGGCTCTTCTTTTCCCACTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGC 40361906
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
|||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||
Sbjct 40361905 TAGATAGTAGGTAGGGACAGTGGTAATCTCATTCATCCATTCATGGACGTCACTAATTAG 40361846
Query 414 ATGACGAGGCATTTGGCTA 432
|||| ||||||||||||||
Sbjct 40361845 ATGATGAGGCATTTGGCTA 40361827
Score = 316 bits (350), Expect = 7e-84
Identities = 335/439 (76%), Gaps = 18/439 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| |||| || ||||||| || | |||| |||||||||||||||||||||
Sbjct 40371251 CTTCTGCTCCACAGAAGGTTTCTGTCCTGCCTGAGCTTGCCTTAGGACACCTGCGTTATG 40371192
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| | | || ||| || |||||||||||||||| |||| || | | ||
Sbjct 40371191 GTTTGACAGGTATACCACCCTAGTCAAACTCCCCACCTGATGCTGTCCCCAGAGCAGGTC 40371132
Query 127 GGCCCGCGAA-------GGACCTTAACGCCAGAAAATGG-----TCGGTGAAGACCAGTT 174
| || | | || ||| ||||||| | |||| | ||
Sbjct 40371131 GCACCCAGCATTCACCGGGTGCTTGGAGCCAGAAGCGAGACCCCTCGGGGCTCCCCC--- 40371075
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC 234
|| | ||| || |||||||||||| ||| || |||||||||||||| ||| |
Sbjct 40371074 CCACCTCACTGGGTAAGTAAAAAAATGATGAG--TAGTGGTATTTCACCGGCGGCCCGGG 40371017
Query 235 GGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
||| |||||||| ||||||| || ||| ||| |||||| | | ||||| |||||||||
Sbjct 40371016 GGCCTCCCACTTTTTCTACAACTTTCATGTCTCTTCACAGTGCCAGACTACAGTCAAGCT 40370957
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||||||| |||||||| ||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct 40370956 CAACAGGCTCTTCTTTTCCCACTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGC 40370897
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
|||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||
Sbjct 40370896 TAGATAGTAGGTAGGGACAGTGGTAATCTCATTCATCCATTCATGGACGTCACTAATTAG 40370837
Query 414 ATGACGAGGCATTTGGCTA 432
|||| ||||||||||||||
Sbjct 40370836 ATGATGAGGCATTTGGCTA 40370818
Score = 141 bits (156), Expect = 3e-31
Identities = 92/101 (91%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492
||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||
Sbjct 40360514 CCTTAAGAGAGTCATAGTTACTCCCACCGTTTACCTGCGCTTCATTGAATTTCTTCACTT 40360455
Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||| ||||||||| ||||||||| | ||||||
Sbjct 40360454 TGACATTCAGACCACTGGGCATAAATCACATCACATCAACA 40360414
>seq33
Length=109106476
Score = 264 bits (292), Expect = 4e-68
Identities = 176/196 (90%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||| | ||| ||||| | | ||||||||| |||||||
Sbjct 8050545 CTCCCACTTATTCTACACCTCTGATGTCTCTTCACGGTGCCAGACTAGAGTTGAGCTCAA 8050604
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 8050605 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 8050664
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||| ||||||||||||| || |||| ||||||| | ||||||||||||||
Sbjct 8050665 ATAGTAGGTAGGGGCAGTGGGAATCTCATTCATCCGTTCATGCACATCACTAATTAGATG 8050724
Query 417 ACGAGGCATTTGGCTA 432
| ||||||||||||||
Sbjct 8050725 ATGAGGCATTTGGCTA 8050740
>seq22
Length=66201059
Score = 260 bits (288), Expect = 5e-67
Identities = 150/154 (97%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 380 TCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAG 439
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 39486902 TCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAG 39486843
Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 39486842 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATT 39486783
Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||| |||||||||
Sbjct 39486782 CAGAGCACTGGGCAGAAATCACATCGCGTCAACA 39486749
Score = 140 bits (154), Expect = 1e-30
Identities = 124/154 (81%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAA 233
|||| ||| | ||||| |||||| ||||| ||||||||||||||| || | | |
Sbjct 29317989 CCGCCTCAACGGGTAAGTGAAAAAATTATAAGAGTAGTGGTATTTCACCGGCAGTCCAGG 29317930
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
| |||||||||||||||||||||||| ||| |||||| | | |||||||||||||||
Sbjct 29317929 GGTCTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCT 29317870
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
||||||||||||||||||| ||| || | ||||
Sbjct 29317869 CAACAGGGTCTTCTTTCCCTGCTATTTTCTCCAA 29317836
>seq27
Length=40567063
Score = 181 bits (200), Expect = 3e-43
Identities = 176/225 (78%), Gaps = 1/225 (0%)
Strand=Plus/Minus
Query 209 TAGTGGTATTTCACTTGC-GCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267
|||||||||| || | || ||| | ||||||||| ||| |||| |||| ||| |
Sbjct 23582973 TAGTGGTATTACAGTAGCAGCCTCAGGAATTCCCACTTACTCTGCACCACTCATGTCTCT 23582914
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
||| | | ||||||||||||||||||||| ||||||||| || |||||| |||||
Sbjct 23582913 ATACAGTGCCAGACTAGAGTCAAGCTCAACAGCATCTTCTTTCACCAGTGATTCTGCCAA 23582854
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387
| || |||||||||||||| ||| ||| || ||||||||||||||| |||||||| ||
Sbjct 23582853 GGCCATTCCCTTGGCTGTGATTTTGCTCTATTGTAGATAGGGACAGTAGGAATCTCATTC 23582794
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||| ||||| | | | | ||||||||||| |||||| |||| ||
Sbjct 23582793 TTCCTTTCATACTCATTATTAATTAGATGATGAGGCACTTGGATA 23582749
>seq1
Length=270692262
Score = 158 bits (174), Expect = 4e-36
Identities = 116/135 (86%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||| ||| | || |||||| || ||||||||||||||||||| |||||
Sbjct 40208105 AGGGTCTTCTTTCCCTGCTCACTCTGCCAAGACCATTCCCTTGGCTGTGGTTTCACTAGA 40208046
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
| || |||||||||||||||||||||| |||||||||||| | ||||||| | || ||
Sbjct 40208045 CAACAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACATCACTAAGTCGACGA 40207986
Query 418 CGAGGCATTTGGCTA 432
||||||||| ||||
Sbjct 40207985 TGAGGCATTTAGCTA 40207971
Score = 98.7 bits (108), Expect = 3e-18
Identities = 80/97 (82%), Gaps = 5/97 (5%)
Strand=Plus/Plus
Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498
|| ||| |||||||| | ||| ||||||| |||| |||||||||||| | |||
Sbjct 83832315 GAAAGTTCTAGTTACTTCTGCCATTTACCCATGCTTC-----ATTTCTTCACTTAGCCAT 83832369
Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||| ||||||||
Sbjct 83832370 TCAGAGCACTGGGCAGAAATCACATTGCATCAACATC 83832406
Score = 98.7 bits (108), Expect = 3e-18
Identities = 80/96 (83%), Gaps = 1/96 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | ||||| || |||| || | |||| | ||||||||||||||||||| |
Sbjct 86828212 CTTCTGCTCCATAGGAGGTT-CTGTCCTTCCTGAGCTCGCCTTAGGACACCTGCGTTACG 86828270
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102
|||| |||| ||| ||||||||| ||||||||||||
Sbjct 86828271 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCAC 86828306
Score = 93.3 bits (102), Expect = 1e-16
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504
|||| ||||||| ||| ||| | || || ||||||||||||||||||||||||||||
Sbjct 40207060 CATAATTACTCCTGCCATTTCCTTGCACTGCATTGAATTTCTTCACTTTGACATTCAGAG 40207001
Query 505 CACTGGGCAGAAATCACATTGCGTCAACA 533
|| |||||| |||||||||| ||||||
Sbjct 40207000 CAAGGGGCAGGAATCACATTGTATCAACA 40206972
Score = 80.6 bits (88), Expect = 9e-13
Identities = 71/87 (82%), Gaps = 4/87 (5%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||| |||||||||| ||| ||||| ||| |||||| | | |||||||||| |||||||
Sbjct 83830399 CTCTCACTTATTCTTCACTTCTCAGGTCTCTTCACAGTGCCAGACTAGAGTCTAGCTCAA 83830458
Query 297 CAGGGTCTTCTTTCCCC--GCTGATTC 321
||||| || ||||||| ||||||||
Sbjct 83830459 CAGGG--TTGTTTCCCCCTGCTGATTC 83830483
Score = 78.8 bits (86), Expect = 3e-12
Identities = 69/85 (81%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAA 233
|||| ||| | ||||| ||||||||||||| ||||||||||||||| || |||
Sbjct 128506919 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCAGCCCGGG 128506860
Query 234 CGGCTCCCACTTATTCTACACCTCT 258
| ||||||||||||||||||||||
Sbjct 128506859 GGCCTCCCACTTATTCTACACCTCT 128506835
>seq66
Length=60305753
Score = 147 bits (162), Expect = 7e-33
Identities = 92/99 (93%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||| ||||||||||||||||||| | |||||||| |||| ||||||||||||||||||
Sbjct 31682131 TTACGAGAGTCATAGTTACTCCCACTGTTTACCCATGCTTCATTGAATTTCTTCACTTTG 31682072
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||
Sbjct 31682071 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 31682033
Score = 116 bits (128), Expect = 1e-23
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||| |||||||||||| |
Sbjct 32680727 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGCACACCTGCGTTACG 32680668
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCAT 115
|||| |||| ||| ||||||||| |||||||||||||||| ||||||
Sbjct 32680667 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGATGCTGTCAT 32680619
>seq40
Length=20244435
Score = 136 bits (150), Expect = 1e-29
Identities = 119/146 (82%), Gaps = 3/146 (2%)
Strand=Plus/Plus
Query 194 aaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTCCCACTTATTCTAC 252
|||||| |||| | ||||||||||||||| | | || | | ||||||||||||||||
Sbjct 542530 AAAAAATGATAGGAGTAGTGGTATTTCACCAGTGGCCTGGAGGCCTCCCACTTATTCTAC 542589
Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312
|||||||| || ||||| | | ||||||||| |||||||||||||||| |||||||
Sbjct 542590 ACCTCTCATCTC--TTCACGGTGCCAGACTAGAGTTAAGCTCAACAGGGTCTGCTTTCCC 542647
Query 313 CGCTGATTCCGCCAAGCCCGTTCCCT 338
| ||||||| |||||||| |||| ||
Sbjct 542648 CACTGATTCTGCCAAGCCTGTTCACT 542673
>seq21
Length=203625132
Score = 120 bits (132), Expect = 1e-24
Identities = 87/101 (86%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492
|||||||||||||||| || ||| | || |||||| | |||| |||||||||||||||
Sbjct 180216977 CCTTAAGAGAGTCATACTTCCTCTCACCATTTACCTGAGCTTCACTGAATTTCTTCACTT 180216918
Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| ||||||||||||| |||| || ||||||
Sbjct 180216917 TGACATTCAGAGAACTGGGCAGAAATTACATCGCATCAACA 180216877
Score = 80.6 bits (88), Expect = 9e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|||||||||| | ||||||| |||||||||||| ||||| |||||||| ||||||||||
Sbjct 180216788 TAGATAGTAGGTGGGGACAGCGGGAATCTCGTTTATCCACTCATGCGCATCACTAATTA 180216846
>seq30
Length=41294510
Score = 96.9 bits (106), Expect = 1e-17
Identities = 133/187 (71%), Gaps = 8/187 (4%)
Strand=Plus/Plus
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| ||| || | ||| ||| |||||| |||| | | |||||||| |||| |
Sbjct 2820614 CCCACTTATCCTAGACGTTTCATGTCTCTTCACAGAGTCAGGTTTGAGTCAAGATCAATA 2820673
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
| |||||| ||| ||||| | ||| |||| |||||||||||| | ||| || |
Sbjct 2820674 AAGCCTTCTTGCCCTACTGATGCTGCCCAGCCTGTTCCCTTGGCTCGGATTTTACTGGGC 2820733
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
| | |||||| ||||||| || ||| |||||| | | ||| ||||| ||
Sbjct 2820734 A--------GCACAGTGAGAATCTCATTCATCTATTCATCCATATTGCTATTTAGACGAT 2820785
Query 419 GAGGCAT 425
|||||||
Sbjct 2820786 GAGGCAT 2820792
>seq62
Length=117929553
Score = 95.1 bits (104), Expect = 4e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| |||||||| |||||| |||
Sbjct 65976099 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGATACCTGCTTTACA 65976040
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| ||| ||| || |||||| |||||||||||||||||| ||||
Sbjct 65976039 TTTTTTCAGGTGTACCACCCCAGTCAAACTCCCCACCTGACACTGTC 65975993
>seq14
Length=1627580
Score = 95.1 bits (104), Expect = 4e-17
Identities = 97/124 (78%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAA 233
|||| ||| | ||||| ||||||||||||| ||||||||||||||| || |||
Sbjct 1220913 CCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCCGGG 1220854
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
| ||||||||||||||||||||||| ||| |||||| | | | |||| ||||| ||
Sbjct 1220853 GGCCTCCCACTTATTCTACACCTCTCCTGTCTCTTCACAGTGCCAG-CTAGGGTCAACCT 1220795
Query 294 CAAC 297
||||
Sbjct 1220794 CAAC 1220791
>seq39
Length=18120080
Score = 86.0 bits (94), Expect = 2e-14
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79
|||| ||||||| || | |||| | ||||||||| |||| ||||||||| || |||
Sbjct 14998578 GGAGGTTTCTGTCCTTCCTGAGCTCAACTTAGGACATCTGCTTTATGGTTTGTTAGGTGT 14998637
Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATG 111
|| |||||| |||||||||||||||||| ||
Sbjct 14998638 ACCACCCCAGTCAAACTCCCCACCTGACACTG 14998669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635198855360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |