Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21]
186,068 sequences; 1,520,334,138 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq45583 255 9e-66
seq14210 170 3e-40
seq70536 75.2 2e-11
>seq45583
Length=22422
Score = 255 bits (282), Expect = 9e-66
Identities = 198/232 (85%), Gaps = 3/232 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||| ||| |
Sbjct 17099 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 17042
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|||||| |||| || |||| |||| ||||||||||||||| ||| | |||||| ||||
Sbjct 17041 CTCGTTAAAGATTAATAATTACAATAATCTATCCCCATCACAATGCACATTCAAAAGATT 16982
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | | | |||||||| ||| ||| |||| || ||||| ||||||||||||||
Sbjct 16981 ACCTAAGCTTACCAGCCAAGGTTATAAACTTGTTGGATGCATCATTGTAGCGCGCGTGCA 16922
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 16921 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 16870
>seq14210
Length=56659
Score = 170 bits (188), Expect = 3e-40
Identities = 176/225 (78%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 10 GCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAA 69
|||||||| || ||||||||||||| ||||| ||| |||||| |||||| ||||||| |
Sbjct 29862 GCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-CCTCGTTCAT 29919
Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACC 128
| || ||||||||| | |||||||||| || ||||| | ||||||| |||
Sbjct 29920 GGGGAATAATTGCAATCCCCGATCCCCATCATGAATGGGGTTCAACGGGTTACCCGCACC 29979
Query 129 TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAAC 188
||||||| ||| | | || || ||| |||||||||||||||||| |||| | ||
Sbjct 29980 TGTCGGCGTAGGGTAGACACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 30039
Query 189 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||||||||||||||||||||||||||| ||||| || |||||
Sbjct 30040 ATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 30083
>seq70536
Length=3138
Score = 75.2 bits (82), Expect = 2e-11
Identities = 52/58 (90%), Gaps = 1/58 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58
||||||||||||||||| || ||||||||||||| ||||| ||| |||||| ||||||
Sbjct 3019 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT 2963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750644494620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |