Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21]
186,068 sequences; 1,520,334,138 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq45583 131 9e-29
seq14210 104 1e-20
seq34025 71.6 8e-11
>seq45583
Length=22422
Score = 131 bits (144), Expect = 9e-29
Identities = 102/121 (84%), Gaps = 7/121 (6%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56
|||||||||||||||||||||||||||||||| || ||||| | || || || ||
Sbjct 16570 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCTGAAGGAGTCGTTTATAAAGACGACCTC 16511
Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116
| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 16510 ---CAATCTCTAGTCGGCATAGTTTATAGTTAAGACTACGACGGTATCTGATCGTCTTCG 16454
Query 117 A 117
|
Sbjct 16453 A 16453
>seq14210
Length=56659
Score = 104 bits (114), Expect = 1e-20
Identities = 90/112 (80%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 30384 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 30443
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTC 112
|||| ||||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct 30444 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTC 30495
>seq34025
Length=13952
Score = 71.6 bits (78), Expect = 8e-11
Identities = 81/109 (74%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| | ||| |||| ||| |||| |||| | |
Sbjct 6191 GAACCCAAAGACTTTGGTTTCCTGGAAGCTGCCCGGCGGGTCATGGGAATAAAGCCACTG 6132
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATC 109
|||| ||||||||||| ||||| ||| |||| || |||||||||||
Sbjct 6131 GATCACTAGTCGGCATCGTTTATGGTCGGAACTATGATGGTATCTGATC 6083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277914362520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |