Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21]
186,068 sequences; 1,520,334,138 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq45583 214 3e-53
>seq45583
Length=22422
Score = 214 bits (236), Expect = 3e-53
Identities = 203/255 (80%), Gaps = 7/255 (3%)
Strand=Plus/Plus
Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC---CTTTGCTCGAATACA 123
||||| ||||||||||| |||||||||||||| |||||||| | || | ||||||
Sbjct 16201 CAGGATTTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGCTAACGTT--TTGAATACT 16258
Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||| ||||||| | | ||||| || ||||||| || ||
Sbjct 16259 GCAGCATGGAATAATAAAATAGGATTTTAG-TTCTACGTTATTGGTTTTAAGAACTAAAT 16317
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||| |||||| ||| ||||| | ||||| || |||||||||||||||||||
Sbjct 16318 TAATGATTGATAGGGGCAGTTGGGGGCATTTGTATTTAACTGTCAGAGGTGAAATTCTTA 16377
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||||| || ||||| |||||||||||||| || |||| ||||||||||||||||| |
Sbjct 16378 GATTTGTTAAAGACACACTACTGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AG 16436
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 16437 AACGAAAGTTAGGGG 16451
Score = 141 bits (156), Expect = 2e-31
Identities = 135/170 (79%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| |||| |||| |||||| ||| | ||||||||||||||||||| |||||
Sbjct 9445 ATGCTCTTAACTGAGTGTCCCGGGGGTCCAAAGCGTTTACTTTGAAAAAATTAGGGTGTT 9504
Query 99 CAAAGCAGGCC-TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157
||||||||||| |||| |||||| ||| |||||||| ||||||||| | ||||||
Sbjct 9505 CAAAGCAGGCCGGTTGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTTC 9563
Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGG 207
|||||||||||||| || || | | |||||||| ||||| | ||||
Sbjct 9564 TATTTTGTTGGTTTTCAGAACTGGGGCCATGATTAAGAGGGACGGCCGGG 9613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913497105664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |