Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq45583 86.0 7e-15 >seq45583 Length=22422 Score = 86.0 bits (94), Expect = 7e-15 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGGG-CGTAAGCCTGCTTTGAACACTCTAA 92 ||||||| |||||||||||||| |||||| ||| ||||||||| |||||||||| Sbjct 16282 TCCTATTTTATTATTCCATGCTGCAGTATTCAAAACGTTAGCCTGCTTGAAACACTCTAA 16223 Query 93 TTTTCTCAAGGTAAAAGTCCTG 114 ||||||||| |||||| ||||| Sbjct 16222 TTTTCTCAAAGTAAAAATCCTG 16201 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/101 (80%), Gaps = 6/101 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||||| ||| Sbjct 9577 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGC- 9520 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 || ||||||||||||||| |||||||| |||| ||||| Sbjct 9519 -AACCGGCCTGCTTTGAACACCCTAATTTTTTCAAAGTAAA 9480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594127131912