Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21]
186,068 sequences; 1,520,334,138 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq45583 259 9e-67
seq14210 179 7e-43
>seq45583
Length=22422
Score = 259 bits (286), Expect = 9e-67
Identities = 213/258 (83%), Gaps = 1/258 (0%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||| ||||| | || || | | | ||||||||||||||||||||||||||||
Sbjct 16841 CTTCTTAGAAGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTG 16900
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || |
Sbjct 16901 ATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACAATGATGCATCCAACAAGTTTATAA 16960
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||| || | | | ||||||||| | || | | ||| |||||||||| ||||
Sbjct 16961 CCTTGGCTGGTAAGCTTAGGTAATCTTTTGAATGTGCATTGTGATGGGGATAGATTATTG 17020
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||
Sbjct 17021 TAATTATTAATCTTTAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGCTGATT 17080
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 17081 ACGTCCCTGCCCTTTGTA 17098
>seq14210
Length=56659
Score = 179 bits (198), Expect = 7e-43
Identities = 192/250 (77%), Gaps = 3/250 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 30109 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 30052
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || |
Sbjct 30051 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGTCTAC 29992
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| |||| |||| |||||| | | || | | || || ||||||| | | ||||
Sbjct 29991 CCTACGCCGACAGGTGCGGGTAACCCGTTGAACCCCATTCATGATGGGGATCGGGGATTG 29932
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||||
Sbjct 29931 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 29872
Query 311 ACGTCCCTGC 320
| ||||||||
Sbjct 29871 AAGTCCCTGC 29862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945437563904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |