Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq51488 84.2 9e-11 >seq51488 Length=4811 Score = 84.2 bits (92), Expect = 9e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 349085 TCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAG 349144 ||||| || | |||| |||||||||||||| ||||||| ||| || || |||||||| Sbjct 1580 TCCTTCAGCCGAGGCACCCCCAGGGTCACGTTTTTGGCCGAGACCCCAGCGTAGTGGAAG 1521 Query 349145 GTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACC 349204 || | |||||||| ||| || ||| || || | | ||||| | || | | || ||| Sbjct 1520 GTGTTGAGGGTCATCTGGGTAGCGGGTTCTCCCAGGGACTGGGCAGCCAAGGCCCCCACC 1461 Query 349205 ATCTCGCCGGG 349215 ||||| || || Sbjct 1460 ATCTCACCAGG 1450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079647969798264