Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq935 192 1e-46 >seq935 Length=7348 Score = 192 bits (212), Expect = 1e-46 Identities = 210/275 (76%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| |||| |||| |||||| || | ||||||||||||||||||||||||| Sbjct 1458 ATGCTCTTAACTGAGTGTCCCGGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTT 1517 Query 99 CAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 ||||||||||| | || |||||| ||| |||||||| ||||||||| | |||||| Sbjct 1518 CAAAGCAGGCCGGTCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTTC 1576 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| | |||| | |||||||| ||||| | |||||| | ||| Sbjct 1577 TATTTTGTTGGTTTTCGGAACCGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTA 1636 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || | |||||||||||||||||| ||||| | | | |||||||| || Sbjct 1637 TTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGACCCAGAGCGAAAGCATTT 1696 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 1697 GCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910867626240