Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq434049 91.5 6e-13 seq234392 84.2 9e-11 >seq434049 Length=673 Score = 91.5 bits (100), Expect = 6e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 349069 CGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGAC 349128 || ||||| || |||||||||| || |||| || | ||| | |||| ||| || || Sbjct 155 CGAGGCGTTGATGATCTCCTTGATCCTTGGCACCCCTAAGGTGATGTTCATGGAGGCCAC 214 Query 349129 GCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGC 349181 ||||||||| ||||| |||| ||| |||| ||||||| |||||| ||||||| Sbjct 215 GCCGGCAAAATGGAAAGTCTTGAGAGTCATCTGCGTGCCGGGCTCCCCGATGC 267 >seq234392 Length=3348 Score = 84.2 bits (92), Expect = 9e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 349085 TCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAG 349144 ||||| || | |||| |||||||||||||| ||||||| ||| || || |||||||| Sbjct 2751 TCCTTCAGCCGAGGCACCCCCAGGGTCACGTTTTTGGCCGAGACCCCAGCGTAGTGGAAG 2810 Query 349145 GTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACC 349204 || | |||||||| ||| || ||| || || | | ||||| | || | | || ||| Sbjct 2811 GTGTTGAGGGTCATCTGGGTAGCGGGTTCTCCCAGGGACTGGGCAGCCAAGGCCCCCACC 2870 Query 349205 ATCTCGCCGGG 349215 ||||| || || Sbjct 2871 ATCTCACCAGG 2881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2071786480817240