Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13]
81 sequences; 2,640,792,433 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq68 170 9e-41
seq40 127 9e-28
seq78 125 3e-27
seq38 114 6e-24
seq73 84.2 1e-14
>seq68
Length=189227759
Score = 170 bits (188), Expect = 9e-41
Identities = 99/102 (97%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126060625 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 126060684
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||| || |||||||||||||||| ||||||||||
Sbjct 126060685 CCGAATCCCCGTCCTGCGGTGGGGCGCGGGAAATGTGGCGTA 126060726
>seq40
Length=78824398
Score = 127 bits (140), Expect = 9e-28
Identities = 87/98 (89%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
Sbjct 38054700 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGTGAGTGAACAGGGAAGAGCCCAGTG 38054641
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98
|||||||||| || ||||||| | | ||| ||||||
Sbjct 38054640 CCGAATCCCCATCCTGCGGTGGTGTGTAGGAAATGTGG 38054603
>seq78
Length=264820526
Score = 125 bits (138), Expect = 3e-27
Identities = 89/102 (87%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| ||
Sbjct 97911240 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACAGCAAGCGAACATGGAAGGGCCCATCG 97911299
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||| | ||| |||||| ||| |||| |||||| |||
Sbjct 97911300 CCGAATCCCTGTCCCACGGTGGAGCGTGGGAAATGTGGTGTA 97911341
Score = 113 bits (124), Expect = 2e-23
Identities = 86/102 (84%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct 104582355 GGAAAAGAAACTAACCAGGATTCCATCAGTAACAGTGAGTGAACAGGGAAGAGCCCAGCG 104582414
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| ||||||| | || || || ||| | ||| | ||| |||
Sbjct 104582415 CTGAATCCCTGTCCTGCAGTTGGGGACAGGAATTTTGGTGTA 104582456
>seq38
Length=209695328
Score = 114 bits (126), Expect = 6e-24
Identities = 89/106 (84%), Gaps = 4/106 (4%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| || |
Sbjct 120585179 GGAAAAGAAACTAACCAGGATTCCCTCTGTAGCGGTGAGTGAACAGGGAAGAGCGCATCA 120585238
Query 61 CCGAATCCCCGCCCCGCG----GTGGGGCGCGGGACATGTGGCGTA 102
| ||||||||| |||| | |||||| | |||| ||||||| ||
Sbjct 120585239 CTGAATCCCCGTCCCGTGGGGTGTGGGGTGTGGGAAATGTGGCATA 120585284
>seq73
Length=52630461
Score = 84.2 bits (92), Expect = 1e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61
||||||||| |||||||||||||||||||||| || ||||| |||||||| ||||| | |
Sbjct 37858720 GAAAAGAAATTAACCAGGATTCCCTCAGTAACAGCAAGTGAGCAGGGAAG-GCCCAACAC 37858778
Query 62 CGAATCCCCG-CCCCGCGGTGGGGCGCGGGACATGTGG 98
| |||||| | ||| | |||| | || | ||||||
Sbjct 37858779 CAAATCCCTGATCCCATGTTGGGATGGGGAAAATGTGG 37858816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230399825040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |