Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gavialis_20gangeticus_20[refseq_20GCF_5F001723915.1_202016-09-13]
81 sequences; 2,640,792,433 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq60 82.4 5e-14
seq39 82.4 5e-14
>seq60
Length=24207467
Score = 82.4 bits (90), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| | ||||||||| |||||||||||||||||||
Sbjct 5222891 CTCACTAAACCATC-CAATCGGTAGTA-GTGACGGGCGGTGTGTACAAAGGGCAGGGACT 5222834
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 5222833 TAAT-CAACGCGAGCT 5222819
>seq39
Length=85626906
Score = 82.4 bits (90), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 49422193 CTCACTAAACCATC-CAATCGGTAGTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACT 49422250
Query 109 TAATACAACGCAAGCT 124
|||| |||| ||||||
Sbjct 49422251 TAAT-CAACTCAAGCT 49422265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799771580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |