Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10288 183 5e-44 seq39048 178 2e-42 seq26966 174 2e-41 seq22844 95.1 2e-17 seq16342 91.5 2e-16 seq3399 91.5 2e-16 seq17952 89.7 8e-16 seq13972 89.7 8e-16 seq6798 86.0 9e-15 seq6805 84.2 3e-14 seq2849 84.2 3e-14 seq6723 82.4 1e-13 seq6165 78.8 1e-12 seq16303 77.0 5e-12 seq16264 75.2 2e-11 seq7874 73.4 6e-11 >seq10288 Length=20680 Score = 183 bits (202), Expect = 5e-44 Identities = 184/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 9334 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 9391 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 9392 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 9451 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||||| ||| | | || | ||| |||||||||||||||||| Sbjct 9452 ACCCGCGCCTGTCGGCGTAGGGTAGACACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 9511 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 9512 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 9564 >seq39048 Length=1979 Score = 178 bits (196), Expect = 2e-42 Identities = 183/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 591 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 534 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | | ||||||||||| ||||| | || Sbjct 533 CTCGTTCATGGGGAATAATTGCAATCCCCGAACCCCATCACGAATGGGGTTCAACGGGTT 474 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||||| ||| | | || | ||| |||||||||||||||||| Sbjct 473 ACCCGCGCCTGTCGGCGTAGGGTAGACACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 414 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 413 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 361 >seq26966 Length=1198 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 664 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 607 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 |||||| | | || ||||||||| | |||||||||||| ||| || | | || Sbjct 606 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGGATGGGGTTCAACGGGTT 547 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||| ||| | | || | ||| |||||||||||||||||| Sbjct 546 ACCCCTGCCTGTCGGCGTAGGGTAGACACAAGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 487 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | ||||||||||||||||||||||||||| || ||||| || ||||| Sbjct 486 GCCCCGGACATCTAAGGGCATCACAGACCTGTTACTG-CTCAATCTCGGGTGGC 434 >seq22844 Length=10872 Score = 95.1 bits (104), Expect = 2e-17 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||| ||| Sbjct 538 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAA-TTC 595 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 99 |||||| | | || ||||||||| | ||||||||| Sbjct 596 CTCGTTCATGGGAAATAATTGCAATCCCCGATCCCCATC 634 >seq16342 Length=253037 Score = 91.5 bits (100), Expect = 2e-16 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 159 CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 || ||||||||||||||||| |||| | |||||||||||||||||||||||||||||| | Sbjct 33897 CACCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-C 33955 Query 219 TCAAACT 225 |||| || Sbjct 33956 TCAATCT 33962 >seq3399 Length=865917 Score = 91.5 bits (100), Expect = 2e-16 Identities = 94/122 (77%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 112 CAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCG 171 || || ||||||| ||||||||| ||| | | || | ||| ||||||||||| Sbjct 290022 CATAGTTTACCCGCGCCTGTCGGCGTAGGGTAGACACAAGGTGAGCCAGTCAGTGTAGCG 289963 Query 172 CGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 |||||| ||| | ||||||||||||||||||||||| |||||| ||||| ||| ||| Sbjct 289962 TGCGTGCAACCCCGGACATCTAAGGGCATCACAGACCTCTTATTG-CTCAATCTTGGGTG 289904 Query 232 GC 233 || Sbjct 289903 GC 289902 >seq17952 Length=2726 Score = 89.7 bits (98), Expect = 8e-16 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 2058 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 2002 >seq13972 Length=1363976 Score = 89.7 bits (98), Expect = 8e-16 Identities = 83/103 (81%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| || |||||| |||| ||| Sbjct 482031 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCTGCACTTACTGGGAA-TTC 482088 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 || ||| | | || ||||| ||| | ||||||||||||| Sbjct 482089 CTTGTTCATGGGGAATAATTGAAATCCCCGATCCCCATCACGA 482131 >seq6798 Length=213673 Score = 86.0 bits (94), Expect = 9e-15 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| | ||| ||| |||||| |||| ||| Sbjct 34820 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-AGGACCCGCACTTACTGGGAA-TTC 34763 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCAC 101 || ||| | | || ||||||||| | |||||||| || Sbjct 34762 CTTGTTCATGGGGAATAATTGCAATCCCCGATCCCCATTAC 34722 >seq6805 Length=185010 Score = 84.2 bits (92), Expect = 3e-14 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | ||||||||||||| ||||| | | |||||| |||| ||| Sbjct 162267 GTACAAAGGGCAGGGACTTCATCAACGCGAGCTT-ATGACCCACACTTACTGGGAA-TTC 162324 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| | | || ||||||||| | || ||||||| || Sbjct 162325 CTCGTTCATGGGGAATAATTGCAATCCCCGATTCCCATCAGGA 162367 >seq2849 Length=231113 Score = 84.2 bits (92), Expect = 3e-14 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||| ||| Sbjct 20220 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAA-TTC 20163 Query 61 CTCGTTGAAGACCAACAATTGCA 83 |||||| | | || ||||||| Sbjct 20162 CTCGTTCATGGGGAATAATTGCA 20140 >seq6723 Length=1189045 Score = 82.4 bits (90), Expect = 1e-13 Identities = 120/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTC 132 || ||||||||| | |||||||||| || | ||||| | |||||| | |||| Sbjct 660519 AATAATTGCAATCCCCGATCCCCATCATGAATAGGTTTCAGCGGGTTACCCACAACTGTT 660578 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG-CCCAGAACATC 191 ||| ||| | | || ||||| | ||||||||| || ||| | |||||| |||| Sbjct 660579 GGCATAGGGTAGACACATGTTGAGCCAGTAAGTGTAGCGTGCATGCAGTCCCAGA-CATC 660637 Query 192 TAAGGGCAT-CACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||||||| |||||||||||||||| ||| | ||| ||||| Sbjct 660638 TAAGGGCATCCACAGACCTGTTATTG-CTCCATCTTTGGTGGC 660679 >seq6165 Length=390979 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTC--GTTGAATACATCAGTGTAGCGCGCG 175 ||||||| |||||| || ||| |||||| | | ||| ||||||||| ||| | Sbjct 260500 TTACCCGCACCTGTTTGCATAGG--ATAGACACAAGCTGAGCCAGTCAGTGTAGAGCGTG 260557 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 ||| ||| | |||||||||||||||||||||||||||||| Sbjct 260558 TGCAACCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 260598 >seq16303 Length=497319 Score = 77.0 bits (84), Expect = 5e-12 Identities = 104/140 (74%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 96 CATCACGA-TGAAATTTCAAAGATTACCCGGACCTGTCGGCC-AAGGTGATAGACTCGTT 153 |||||||| || ||| | | |||||| ||||||||| ||||| | | || | | Sbjct 336579 CATCACGAATGGGTTTTAACGGGTTACCCACGCCTGTCGGCATAAGGT-AGACACAAGCT 336521 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 || ||||||||| | || ||| |||| ||||||||||||||||||||||||||| Sbjct 336520 GAGCCAGTCAGTGTAGTGTGCATGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTA 336461 Query 214 TTGCCTCAAACTTCCGTGGC 233 ||| ||||| || ||||| Sbjct 336460 TTG-CTCAATCTCGGGTGGC 336442 >seq16264 Length=1824003 Score = 75.2 bits (82), Expect = 2e-11 Identities = 69/85 (81%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||| |||||| ||||| | | |||||| |||| ||| Sbjct 1604777 GTACAAAGGGCAGGGACTTAATCAACGTGAGCTT-ATGACCCACACTTACTGGGAA-TTC 1604720 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 || ||| | | || ||||||||| Sbjct 1604719 CTTGTTCATGGGGAATAATTGCAAT 1604695 >seq7874 Length=439979 Score = 73.4 bits (80), Expect = 6e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 163 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||| || | ||| |||| | ||||||||||||||||||||||||||||||| Sbjct 106968 AGTGTAGTGCACATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC 106914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750604922500