Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq11950 336 4e-90 seq9481 315 1e-83 seq4490 309 5e-82 seq15144 219 7e-55 seq17309 168 1e-39 seq1130 163 5e-38 seq8471 141 2e-31 seq6761 140 6e-31 seq7820 134 2e-29 seq13980 123 4e-26 seq15148 109 9e-22 seq2245 87.8 3e-15 seq6858 86.0 1e-14 seq3156 86.0 1e-14 >seq11950 Length=55752 Score = 336 bits (372), Expect = 4e-90 Identities = 233/264 (88%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 41475 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 41416 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 41415 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 41356 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 41355 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 41296 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | |||||||| ||| Sbjct 41295 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGG 41236 Query 271 CCACACTTTCATGGTTTGTATTCA 294 | | |||||| ||| |||||||| Sbjct 41235 CTTCGCTTTCACGGTCTGTATTCA 41212 Score = 309 bits (342), Expect = 5e-82 Identities = 185/194 (95%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 16878 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 16819 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 16818 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 16759 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 16758 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCTACCACAAGCCAGTTATCC 16699 Query 211 CTGTGGTAACTTTT 224 |||||||||||||| Sbjct 16698 CTGTGGTAACTTTT 16685 Score = 114 bits (126), Expect = 2e-23 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 24302 CTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCT 24243 Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 || | ||| | | | | ||||||| ||||| | |||||| ||| |||||||| Sbjct 24242 GCTTAAAACCCCAAAAGTCAGAAGGATCATGAGGCCCCGCTTTCACGGTCTGTATTCA 24185 >seq9481 Length=962283 Score = 315 bits (348), Expect = 1e-83 Identities = 228/264 (86%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| Sbjct 509249 TCATCAGTAGGGTAAAACTAACCTATCTCATGACAGTCTAATCCCAGCTCACGTTCCCTA 509190 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 509189 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 509130 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct 509129 CATCGAAGGATCAAAAAGCGACGTCACTATGAACGCTTGGCTGCCACAAGGCAGTTATCC 509070 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | ||||||| ||| Sbjct 509069 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCATGAGG 509010 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || |||||| || |||||||| Sbjct 509009 CCCTGCTTTCACAGTCTGTATTCA 508986 >seq4490 Length=938659 Score = 309 bits (342), Expect = 5e-82 Identities = 227/264 (86%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 22831 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 22772 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct 22771 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGTCGA 22712 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct 22711 CATCGAAGGATCAAAAAGCGACGTCACTATGAACGCTTGGCCATCACAAGCCAGTTATCC 22652 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | || ||| ||| Sbjct 22651 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAAAATCACGAGG 22592 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || | |||||| ||| |||||||| Sbjct 22591 CCCCGCTTTCACGGTCTGTATTCA 22568 >seq15144 Length=1175996 Score = 219 bits (242), Expect = 7e-55 Identities = 169/203 (83%), Gaps = 17/203 (8%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct 472593 CATCAGTAGGGTAAAAC----CTGTCTCAGGACGGTCTAAACCCAGCTCATGTTCCCTAT 472538 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||||||||||||||||||| ||| |||||||||||| |||||| Sbjct 472537 TAGTGGGTGAACAATCCAAAACTTGGTGAATTCTGCTTCACAATGATA------------ 472490 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || ||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||| Sbjct 472489 -TCAAAGGATCAAAAAGCAACATTGCTATGAATGCTTGGCCGCCACAAGCCAGTTATCCC 472431 Query 212 TGTGGTAACTTTTCTGGCACCTC 234 ||||||||| |||||| |||||| Sbjct 472430 TGTGGTAACGTTTCTGACACCTC 472408 >seq17309 Length=1098042 Score = 168 bits (186), Expect = 1e-39 Identities = 120/138 (87%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||||| ||| |||||||||||| |||||| |||||||| Sbjct 559551 ATTAGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAAGAAGAGCCA 559610 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||||||||||||| || || ||||||| ||||||| |||||||||||||||| Sbjct 559611 ACATCGAAGGATCAAAAAGTGACATCACTATGAATGCTTGGCCACCACAAGCCAGTTATC 559670 Query 210 CCTGTGGTAACTTTTCTG 227 ||| ||||||| |||||| Sbjct 559671 CCTATGGTAACATTTCTG 559688 >seq1130 Length=1684270 Score = 163 bits (180), Expect = 5e-38 Identities = 129/155 (83%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1680239 AGCTGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAG 1680180 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||| ||||||| |||||| || | ||| | | | ||||||| Sbjct 1680179 TTATCCCTGTGGTAATTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATC 1680120 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCACCTCC 299 | ||||| | |||||| ||| |||||||| |||| Sbjct 1680119 GTGAGGCCCCGCTTTCACGGTCTGTATTCAGCTCC 1680085 >seq8471 Length=72173 Score = 141 bits (156), Expect = 2e-31 Identities = 119/145 (82%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct 19656 ATCGAAGGATCAAAAAGCGACGTCACTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 19715 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||| |||||| || | ||| | | | |||||||| || Sbjct 19716 TGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAAAGTCAGAAGGATCGTGAG 19775 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 ||| | |||||| ||| |||||||| Sbjct 19776 GCCCCGCTTTCACGGTCTGTATTCA 19800 >seq6761 Length=426209 Score = 140 bits (154), Expect = 6e-31 Identities = 82/85 (96%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| Sbjct 32575 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGGTCACGTTCCCTA 32634 Query 91 TTAGTGGGTGAACAATCCAACGCTT 115 ||||||||||||||||||||||||| Sbjct 32635 TTAGTGGGTGAACAATCCAACGCTT 32659 >seq7820 Length=2160633 Score = 134 bits (148), Expect = 2e-29 Identities = 144/189 (76%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 |||||||||| ||||| || || ||||||| |||||| ||||||||||| |||| Sbjct 1249344 AGGGTAAAACCAACCTATCATTAGATAATCTAAACTCAGCTCCTGTTCCCTATTACTGGG 1249403 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 |||| |||||| || | ||||| || || | || | |||||||||| ||||| ||| Sbjct 1249404 TGAAAAATCCACTGCCTGGTGAATTTTGATTTGTAATAACAGGAAGAGCCAACATCCAAG 1249463 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||| | ||| || || || | |||||||||||| |||||||| || |||| Sbjct 1249464 AATCAAAAAGTGATGTCACTGTGCACACCTGGCTGCCACAATCCAGTTATGCC-CTGGTC 1249522 Query 219 ACTTTTCTG 227 | ||| ||| Sbjct 1249523 ATTTTCCTG 1249531 >seq13980 Length=1017554 Score = 123 bits (136), Expect = 4e-26 Identities = 84/94 (89%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 141 GAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAG 200 ||||||| |||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct 34805 GAAGAGCTGACATCGAAGGATCAAAAAGCAACATCGCTATGAATGTTTGGCCACCACAAG 34864 Query 201 CCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||| ||||||||||||||||| |||||| Sbjct 34865 CCAGTTA---CTGTGGTAACTTTTCTGACACCTC 34895 >seq15148 Length=990171 Score = 109 bits (120), Expect = 9e-22 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 499615 GAATTCTGCTTCACAATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGCAACATCGCT 499556 Query 179 ATGAACGCTTGGCTGCCACA 198 ||||| ||||||| ||||| Sbjct 499555 ATGAATGCTTGGCCACCACA 499536 >seq2245 Length=1486917 Score = 87.8 bits (96), Expect = 3e-15 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 || ||||| ||||||| || | | |||||||||||| |||||||||||| ||| |||||| Sbjct 1277041 AAAGATCAGAAAGCAAAGTTGATGTGAACGCTTGGCCGCCACAAGCCAGATATTCCTGTG 1277100 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 | || ||||||| ||||| || | ||||| Sbjct 1277101 GCAATTTTTCTGATACCTCCTGCTTAAAATT 1277131 >seq6858 Length=90760 Score = 86.0 bits (94), Expect = 1e-14 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 ||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||| Sbjct 26793 GATAGGAAGAGCCGACATCAGAGGATCAAAAAGTGACGTTGCTATGAACGCTTGGCCGCC 26734 Query 196 ACAAG 200 |||| Sbjct 26733 GCAAG 26729 >seq3156 Length=2058 Score = 86.0 bits (94), Expect = 1e-14 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||| |||||||||||||| |||||||||||| |||| |||||||||| ||||| | Sbjct 523 ATGATACGAAGAGCCGACATCAGAGGATCAAAAAGTGACGTTGCTATGAACGGTTGGCCG 582 Query 194 CCACAAG 200 ||||||| Sbjct 583 CCACAAG 589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852763824000