Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gekko_20japonicus_20[refseq_20GCF_5F001447785.1_202015-11-25] 191,500 sequences; 2,490,274,461 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10288 188 1e-45 seq39048 185 2e-44 seq26966 183 6e-44 seq22844 107 4e-21 seq13972 100 5e-19 seq6798 98.7 2e-18 seq6805 95.1 2e-17 seq2849 95.1 2e-17 seq16342 93.3 8e-17 seq17952 91.5 3e-16 seq3399 91.5 3e-16 seq16264 86.0 1e-14 seq10565 80.6 5e-13 seq6723 78.8 2e-12 seq6165 77.0 6e-12 seq16303 75.2 2e-11 seq7874 73.4 7e-11 >seq10288 Length=20680 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 9590 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 9533 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || | || | Sbjct 9532 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCTTGTGTCTAC 9473 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| ||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 9472 CCTACGCCGACAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 9413 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 9412 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 9353 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 9352 AAGTCCCTGCCCTTTGTA 9335 >seq39048 Length=1979 Score = 185 bits (204), Expect = 2e-44 Identities = 198/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 335 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 392 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || | || | Sbjct 393 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCTTGTGTCTAC 452 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| ||| |||||| | | || | | ||||| ||||| | | | |||| Sbjct 453 CCTACGCCGACAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGTTCGGGGATTG 512 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 513 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 572 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 573 AAGTCCCTGCCCTTTGTA 590 >seq26966 Length=1198 Score = 183 bits (202), Expect = 6e-44 Identities = 200/259 (77%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| || ||||||||||||| Sbjct 408 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAGTAACAGGTCTGTG 465 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || | || | Sbjct 466 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCTTGTGTCTAC 525 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATT 249 ||| |||| ||| |||||| | ||| ||| | || ||| ||||||| | | ||| Sbjct 526 CCTACGCCGACAGGCAGGGGTAACCC-GTTGAACCCCATCCGTGATGGGGATCGGGGATT 584 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 585 GCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGAT 644 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 645 TAAGTCCCTGCCCTTTGTA 663 >seq22844 Length=10872 Score = 107 bits (118), Expect = 4e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 ||||||| | | |||||||||||| | | | |||||||||| || |||||| ||| |||| Sbjct 632 TGGGGATCGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCA 573 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| ||||||||||| |||||||||||||||| Sbjct 572 TAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 539 >seq13972 Length=1363976 Score = 100 bits (110), Expect = 5e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| ||||||| | | ||| |||||||| | | | ||| |||||| || |||||| || Sbjct 482131 TCGTGATGGGGATCGGGGATTTCAATTATTCCCCATGAACAAGGAATTCCCAGTAAGTGC 482072 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||| ||||||||||| |||||||||||||||| Sbjct 482071 AGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 482032 >seq6798 Length=213673 Score = 98.7 bits (108), Expect = 2e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 ||||||| | | |||||||||||| | | | ||| |||||| || |||||| ||| ||| Sbjct 34726 TGGGGATCGGGGATTGCAATTATTCCCCATGAACAAGGAATTCCCAGTAAGTGCGGGTCC 34785 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| ||||||||||| |||||||||||||||| Sbjct 34786 TAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 34819 >seq6805 Length=185010 Score = 95.1 bits (104), Expect = 2e-17 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 || || |||| || | | |||||||||||| | | | |||||||||| || |||||| | Sbjct 162367 TCCTGATGGGAATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGT 162308 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| ||||||||| | |||||||||||||||| Sbjct 162307 GGGTCATAAGCTCGCGTTGATGAAGTCCCTGCCCTTTGTA 162268 >seq2849 Length=231113 Score = 95.1 bits (104), Expect = 2e-17 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||| Sbjct 20140 TGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGA 20199 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||| |||||||||||||||| Sbjct 20200 TTAAGTCCCTGCCCTTTGTA 20219 >seq16342 Length=253037 Score = 93.3 bits (102), Expect = 8e-17 Identities = 84/103 (82%), Gaps = 11/103 (11%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC--TCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 |||||||||||||| | ||| ||| | |||| | ||||| |||||||||||| Sbjct 33996 CTTCTTAGAGGGACAAGTGGCGTTCAGCTACCCGA-----GATTGAG-CAATAACAGGTC 33943 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 |||||||||||||||||| | |||| ||||||||||||||||| Sbjct 33942 TGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTG 33900 >seq17952 Length=2726 Score = 91.5 bits (100), Expect = 3e-16 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 ||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| Sbjct 2002 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAC 2059 >seq3399 Length=865917 Score = 91.5 bits (100), Expect = 3e-16 Identities = 83/101 (82%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | ||| ||||| |||||| ||||||||| Sbjct 289876 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACCCAAGATTGAG-CAATAAGAGGTCTGTG 289933 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | ||| |||||| |||||||||||| Sbjct 289934 ATGCCCTTAGATGTCCGGGGTTGCACGCACGCTACACTGAC 289974 >seq16264 Length=1824003 Score = 86.0 bits (94), Expect = 1e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| | | | ||| |||||| || |||||| | | ||||| ||| | |||| Sbjct 1604695 ATTGCAATTATTCCCCATGAACAAGGAATTCCCAGTAAGTGTGGGTCATAAGCTCACGTT 1604754 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 1604755 GATTAAGTCCCTGCCCTTTGTA 1604776 >seq10565 Length=3209816 Score = 80.6 bits (88), Expect = 5e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| | | | |||||||||| || |||||| || ||||| | | ||| || Sbjct 2597215 ATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCAGGTCATAAACTCGCATT 2597274 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| ||||||||| |||||| Sbjct 2597275 GATTAAGTCCCTGCCATTTGTA 2597296 >seq6723 Length=1189045 Score = 78.8 bits (86), Expect = 2e-12 Identities = 108/147 (73%), Gaps = 3/147 (2%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTG-ATGCCCTTAGATGTTCTGGGCC-GCACGCGCGCTACACTGAC 171 ||||||||||||||||| |||||||||||||| ||||| | ||| || ||||||||| || Sbjct 660664 GCAATAACAGGTCTGTGGATGCCCTTAGATGT-CTGGGACTGCATGCACGCTACACTTAC 660606 Query 172 AGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 | |||| || | ||| ||| || | ||||||| | | |||| || Sbjct 660605 TGGCTCAACATGTGTCTACCCTATGCCAACAGTTGTGGGTAACCCGCTGAAACCTATTCA 660546 Query 232 TGCTGGGGATAGAGCATTGCAATTATT 258 || ||||||| | | |||||||||||| Sbjct 660545 TGATGGGGATCGGGGATTGCAATTATT 660519 >seq6165 Length=390979 Score = 77.0 bits (84), Expect = 6e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||||||||||||||||||| | ||| |||| ||| |||||||||| Sbjct 260598 CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGTTGCACACGCTCTACACTGAC 260542 >seq16303 Length=497319 Score = 75.2 bits (82), Expect = 2e-11 Identities = 57/66 (86%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||| ||| || | |||| Sbjct 336450 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCTGGGGCTGCATGCACACTAC 336508 Query 166 ACTGAC 171 |||||| Sbjct 336509 ACTGAC 336514 >seq7874 Length=439979 Score = 73.4 bits (80), Expect = 7e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||||||||||||||||||||||||||||| | |||| ||| | || ||||||| Sbjct 106914 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGCATGTGCACTACACT 106968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945386112000