Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8838 192 9e-47 seq635 192 9e-47 seq10299 138 2e-30 seq286 104 4e-20 seq1795 91.5 2e-16 seq731 87.8 3e-15 >seq8838 Length=18498 Score = 192 bits (212), Expect = 9e-47 Identities = 186/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 13217 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 13274 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 13275 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 13334 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||||||||| ||| | | || || ||| |||||||||||||||||| Sbjct 13335 ACCCGCACCTGTCGGCGTAGGGTAGACACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 13394 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 13395 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 13447 >seq635 Length=267516 Score = 192 bits (212), Expect = 9e-47 Identities = 186/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||||| | Sbjct 43446 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-C 43389 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||| ||||||| | | |||||||||| || ||||| || || Sbjct 43388 CTCGTTCATGGGCAATAATTGCAGTCCCCGATCCCCATCATGAATGGGGTTCAACGAGTT 43329 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||||||||| ||| | | || || ||| |||||||||||||||||| Sbjct 43328 ACCCGCACCTGTCGGCGTAGGGTAGACACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 43269 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 43268 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 43216 >seq10299 Length=11823 Score = 138 bits (152), Expect = 2e-30 Identities = 168/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 ||||||| || ||||||||||||| ||||| ||| |||||| |||||| ||||||| | | Sbjct 9191 CAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAATT-CCTCGTTCATG 9248 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCT 129 || ||||||||| | |||||||||| || ||||| | |||| | |||| Sbjct 9249 GGGAATAATTGCAATCCCCGATCCCCATCATGAATGGGGTTCAACGGGTTACTTGCACCT 9308 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 |||||| ||| | | || || ||| ||||| |||||| |||| |||| | | Sbjct 9309 GTCGGCGTAGGGTAGACACACGCTGAGCCAGTCAGTATAGCGCACGTGTAGCCCCGGAAT 9368 Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||||||||||||||||||||||||| ||||| || ||||| Sbjct 9369 TCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 9411 >seq286 Length=419586 Score = 104 bits (114), Expect = 4e-20 Identities = 136/183 (74%), Gaps = 13/183 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| || ||||| ||||||| ||||| ||| |||||| |||| ||| Sbjct 102067 GTACAAAGGGCAGGGAGTTAATCAACACGAGCTT-ATGACCCGCACTTACTGGGAA-TTC 102010 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAA-A 115 |||||| | | || ||||||||| | || |||||||| |||| ||||| Sbjct 102009 CTCGTTCATGGGGAATAATTGCAATCTCCGATTCCCATCAC----AAATGGGGTTCAATG 101954 Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 | ||||||| ||||||| || || | ||||| | ||| |||||||||||| || Sbjct 101953 GGTTACCCGCACCTGTCAGCATAG--GGTAGACATGCTGAGCCAGTCAGTGTAGCGCACG 101896 Query 176 TGC 178 ||| Sbjct 101895 TGC 101893 >seq1795 Length=237030 Score = 91.5 bits (100), Expect = 2e-16 Identities = 80/97 (82%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| ||| |||||| |||| ||| Sbjct 44015 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCACTTACTGGGAA-TTC 43958 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCA 97 |||||| | | || ||||||||| | ||||||| Sbjct 43957 CTCGTTCATGGGGAATAATTGCAATCCCCAATCCCCA 43921 >seq731 Length=337469 Score = 87.8 bits (96), Expect = 3e-15 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||| ||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 212407 TCAGTGTAGCGCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 212349 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 212348 AATCTCGGGTGGC 212336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749840733285