Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8838 340 3e-91 seq4728 282 7e-74 seq264 111 3e-22 seq3019 104 4e-20 seq3651 102 1e-19 seq310 93.3 7e-17 >seq8838 Length=18498 Score = 340 bits (376), Expect = 3e-91 Identities = 233/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 7080 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 7139 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 7140 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 7199 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 7200 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 7259 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | |||||||| ||| Sbjct 7260 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGG 7319 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 7320 CCCCGCTTTCACGGTCTGTATTC 7342 >seq4728 Length=96420 Score = 282 bits (312), Expect = 7e-74 Identities = 185/204 (91%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| Sbjct 20494 TCATCAGTAGGGTAAAACTAACCTGTCTTATGACAGTCTAAACCCAGCTTACGTTCCCTA 20553 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || |||||||||||| ||||| ||| |||||||||||| |||||||||||| |||| Sbjct 20554 TTGGTGGGTGAACAAACCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAACCGA 20613 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct 20614 CATTAAAGGATCAAAAAGCAATGTCGCTATGAATGCTTGGCTGCCACAAGCCAATTATCC 20673 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| |||||| Sbjct 20674 CTGTGGTAACTTTTCTGACACCTC 20697 >seq264 Length=743561 Score = 111 bits (122), Expect = 3e-22 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 235122 GTCACTATGAATGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACC 235063 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || || | ||| | | | |||||||| || || | ||||||| || |||||| Sbjct 235062 TCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGACCCCGCTTTCATCGTCTGTATT 235003 Query 293 C 293 | Sbjct 235002 C 235002 >seq3019 Length=107980 Score = 104 bits (114), Expect = 4e-20 Identities = 107/138 (78%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 || |||||||| |||| ||||||| ||||||| |||||| |||||||||||||| ||| Sbjct 68855 GACCAAAAAGCGACGTTACTATGAATGCTTGGCCTCCACAAACCAGTTATCCCTGTTGTA 68914 Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT--AAAGGATCGATAGGCCACAC 276 ||||||||| |||||| | | ||| | | ||| |||||| | ||||| | | Sbjct 68915 ACTTTTCTGACACCTCCTACTTAAAA--CCCAAAAACTCAGAAGGATGGTGAGGCCCCGC 68972 Query 277 TTTCATGGTTTGTATTCA 294 ||||||||| |||||||| Sbjct 68973 TTTCATGGTCTGTATTCA 68990 >seq3651 Length=89074 Score = 102 bits (112), Expect = 1e-19 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 || |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 62018 GTTGCTATGAATGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACC 62077 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || || | ||| | | | ||||||| ||||| |||||| ||| |||||| Sbjct 62078 TCCTGCTTAAAACCCAAAAAGTCAGAAGGATCATGAGGCCCTGCTTTCACGGTCTGTATT 62137 Query 293 C 293 | Sbjct 62138 C 62138 Score = 73.4 bits (80), Expect = 7e-11 Identities = 57/68 (84%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 80 CACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATA 139 || |||| ||||||||||||||||||||||| |||| ||||| |||||| |||||| Sbjct 61972 CATGTTCTCTATTAGTGGGTGAACAATCCAATGCTTGGAGAATTTTGCTTCACAATGATA 61913 Query 140 GGAAGAGC 147 ||||| || Sbjct 61912 GGAAGTGC 61905 >seq310 Length=712754 Score = 93.3 bits (102), Expect = 7e-17 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 141 GAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAG 200 |||||| ||||| ||||||||||| ||||| || ||| ||| ||| ||||| ||||| Sbjct 35117 GAAGAGGGAACATCAAAGGATCAAAAGGCAACTTCATTATAAACACTTAGCTGCTACAAG 35058 Query 201 CCAGTTATCCCTGTGGTAACTTTT 224 ||| |||||||||||||||||||| Sbjct 35057 CCATTTATCCCTGTGGTAACTTTT 35034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 851867566944