Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq8838 197 3e-48 seq635 197 3e-48 seq10299 141 2e-31 seq1795 107 4e-21 seq286 95.1 2e-17 seq731 91.5 3e-16 >seq8838 Length=18498 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 13473 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 13416 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || || || | Sbjct 13415 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGTCTAC 13356 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| |||| |||||| | | || | | ||||| ||||||| | | |||| Sbjct 13355 CCTACGCCGACAGGTGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 13296 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 13295 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 13236 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 13235 AAGTCCCTGCCCTTTGTA 13218 >seq635 Length=267516 Score = 197 bits (218), Expect = 3e-48 Identities = 203/259 (78%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 43190 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 43247 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || || || | Sbjct 43248 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGTCTAC 43307 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTT-AAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| |||| |||| |||||| || ||| || | | || || ||||||| | | | | Sbjct 43308 CCTACGCCGACAGGTGCGGGTAA-CTCGTTGAACCCCATTCATGATGGGGATCGGGGACT 43366 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||||| | | |||||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 43367 GCAATTATTGCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGAT 43426 Query 310 TACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 43427 TAAGTCCCTGCCCTTTGTA 43445 >seq10299 Length=11823 Score = 141 bits (156), Expect = 2e-31 Identities = 183/249 (73%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | || | |||| || | ||||| |||||||||||||||| Sbjct 9437 CTTCTTAGAGGGACAAGTGGTGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 9380 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| | | |||| |||| |||||| |||||| | || || || | Sbjct 9379 ATGCCCTTAGAATTCCGGGGCTACACGTGCGCTATACTGACTGGCTCAGCGTGTGTCTAC 9320 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| |||| |||| | | || | | || || ||||||| | | |||| Sbjct 9319 CCTACGCCGACAGGTGCAAGTAACCCGTTGAACCCCATTCATGATGGGGATCGGGGATTG 9260 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| Sbjct 9259 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATT 9200 Query 311 ACGTCCCTG 319 | ||||||| Sbjct 9199 AAGTCCCTG 9191 >seq1795 Length=237030 Score = 107 bits (118), Expect = 4e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 ||||||| | | |||||||||||| | | | |||||||||| || |||||| ||| |||| Sbjct 43921 TGGGGATTGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCA 43980 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| ||||||||||| |||||||||||||||| Sbjct 43981 TAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 44014 >seq286 Length=419586 Score = 95.1 bits (104), Expect = 2e-17 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 153 GCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTA 212 ||||| ||||||||||||| | || | || | | || || | |||| ||||| Sbjct 101893 GCACGTGCGCTACACTGACTGGCTCAGCATGTCTACC--CTATGCTGACAGGTGCGGGTA 101950 Query 213 ATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGG 272 | | | || | | | ||| |||| || | |||||||||||| | | | ||||||| Sbjct 101951 ACCCATTGAACCCCATTTGTGATGGGAATCGGAGATTGCAATTATTCCCCATGAACGAGG 102010 Query 273 AATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| || |||||| ||| ||||| ||| || |||||||| ||||||||||||||| Sbjct 102011 AATTCCCAGTAAGTGCGGGTCATAAGCTCGTGTTGATTAACTCCCTGCCCTTTGTA 102066 >seq731 Length=337469 Score = 91.5 bits (100), Expect = 3e-16 Identities = 83/101 (82%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | || | |||| || | ||||| |||||||||||||||| Sbjct 212310 CTTCTTAGAGGGACAAGTGGTGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 212367 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| ||||| ||||||||||||| Sbjct 212368 ATGCCCTTAGATGTCCGGGGCTGCACGTGCGCTACACTGAC 212408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944392508672