Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq8838 100 5e-19 seq4728 89.7 8e-16 seq1297 78.8 2e-12 >seq8838 Length=18498 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||| | ||| || |||| || || | Sbjct 7051 GTACGAGAGGAACCGCAGG-TTCAGACCT-TTGGTGTACGCGCTTGGCTGAGGAGCCAAT 6994 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 6993 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 6940 >seq4728 Length=96420 Score = 89.7 bits (98), Expect = 8e-16 Identities = 89/113 (79%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || || |||| || || | Sbjct 20465 GTACGAGAGGAACCGCAGG-TTCAGA-TCTTTGGTGTACGCTCTTGGCTGAGGAGCCAAT 20408 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | | |||||||||||||| |||||||| ||||| ||||||||||||||||| Sbjct 20407 GGGGTGAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATC 20355 >seq1297 Length=702752 Score = 78.8 bits (86), Expect = 2e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 225522 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 225572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816847777536